RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 MAGEH1Q9H213 219 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 TUBB1Q9H4B7 451 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 COQ10BQ9H8M1 238 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 EPS15L1Q9UBC2 864 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 PER2O15055 1255 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 LRATO95237 230 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 COL6A2P12110 1019 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 CST5P28325 142 aaPredicted RBP15.41■□□□□ 0.06
SCARF1-203ENST00000434376 MAGEA11P43364 429 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 NR1H2P55055 460 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 HERVK_113P63132 956 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 OTUD3Q5T2D3 398 aaPredicted RBP15.41■□□□□ 0.06
SCARF1-203ENST00000434376 KIAA0408Q6ZU52 694 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 SERPINA9Q86WD7 417 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 CLYBLQ8N0X4 340 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 BEND7Q8N7W2 519 aaPredicted RBP15.41■□□□□ 0.06
SCARF1-203ENST00000434376 EID2BQ96D98 161 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 FEM1CQ96JP0 617 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 FEM1AQ9BSK4 669 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 ERVK-6Q9BXR3 956 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 PAIP1Q9H074 479 aaKnown RBP15.41■□□□□ 0.06
SCARF1-203ENST00000434376 CLPBQ9H078 707 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 FARSBQ9NSD9 589 aaKnown RBP15.41■□□□□ 0.06
SCARF1-203ENST00000434376 RSL24D1Q9UHA3 163 aaKnown RBP15.41■□□□□ 0.06
SCARF1-203ENST00000434376 TRPM7Q96QT4 1865 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 RNF103-CHMP3A0A140T963 221 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 NEDD8-MDP1E9PL57 170 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 GSNP06396 782 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 CAPN3P20807 821 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 ELAVL2Q12926 359 aaKnown RBP15.4■□□□□ 0.06
SCARF1-203ENST00000434376 ATP1A4Q13733 1029 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 FAM26DQ5JW98 314 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 PLPP4Q5VZY2 271 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 MARVELD2Q8N4S9 558 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 CYB5D2Q8WUJ1 264 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 MCMBPQ9BTE3 642 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 ADGRE3Q9BY15 652 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 PRSS21Q9Y6M0 314 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 RALGAPA2Q2PPJ7 1873 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 KANSL1LA0AUZ9 987 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 FKTNO75072 461 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 H2AFYO75367 372 aaKnown RBP15.4■□□□□ 0.06
SCARF1-203ENST00000434376 CAPN1P07384 714 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 NEK2P51955 445 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 EPHB3P54753 998 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 TIAL1Q01085 375 aaKnown RBP eCLIP15.4■□□□□ 0.06
SCARF1-203ENST00000434376 IL1RL1Q01638 556 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 MRPL58Q14197 206 aaKnown RBP15.4■□□□□ 0.06
SCARF1-203ENST00000434376 ZNF423Q2M1K9 1284 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 SYVN1Q86TM6 617 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 STN1Q9H668 368 aaKnown RBP15.4■□□□□ 0.06
SCARF1-203ENST00000434376 KLQ9UEF7 1012 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 POLG2Q9UHN1 485 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 REV3LO60673 3130 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 SCN5AQ14524 2016 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 MYO16Q9Y6X6 1858 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 DRGXA6NNA5 263 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 ITGB8P26012 769 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 XIAPP98170 497 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 BCL2L1Q07817 233 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 CBX3Q13185 183 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 STX5Q13190 355 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 CXorf57Q6NSI4 855 aaKnown RBP15.4■□□□□ 0.06
SCARF1-203ENST00000434376 CYHR1Q6ZMK1 362 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 SLC22A9Q8IVM8 553 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 SCAMP4Q969E2 229 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 ZNF558Q96NG5 402 aa15.4■□□□□ 0.06
SCARF1-203ENST00000434376 VWA8A3KMH1 1905 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 IGLV3-10A0A075B6K4 115 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 MAPKAPK2P49137 400 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 MTPNP58546 118 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 ANKRD46Q86W74 232 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 LRRC49Q8IUZ0 686 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 HERC6Q8IVU3 1022 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 GIPC3Q8TF64 312 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 PTCD2Q8WV60 388 aaKnown RBP15.39■□□□□ 0.05
SCARF1-203ENST00000434376 TCEAL4Q96EI5 215 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 ATG10Q9H0Y0 220 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 CHD9Q3L8U1 2897 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 MIA3Q5JRA6 1907 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 TMX2-CTNND1H3BSU7 103 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 PARNO95453 639 aaKnown RBP15.39■□□□□ 0.05
SCARF1-203ENST00000434376 LRG1P02750 347 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 SLC2A4P14672 509 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 ALOX15P16050 662 aaPredicted RBP15.39■□□□□ 0.05
SCARF1-203ENST00000434376 HMOX2P30519 316 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 HK3P52790 923 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 IRF5Q13568 498 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 ANKDD1AQ495B1 522 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 METTL21CQ5VZV1 264 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 Q6ZVU0 165 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 FUNDC1Q8IVP5 155 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 PGAM4Q8N0Y7 254 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 FAM47BQ8NA70 645 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 MRPS31Q92665 395 aaKnown RBP15.39■□□□□ 0.05
SCARF1-203ENST00000434376 ULK4Q96C45 1275 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 THAP11Q96EK4 314 aa15.39■□□□□ 0.05
SCARF1-203ENST00000434376 PAWRQ96IZ0 340 aaKnown RBP15.39■□□□□ 0.05
SCARF1-203ENST00000434376 MRPL9Q9BYD2 267 aaKnown RBP15.39■□□□□ 0.05
SCARF1-203ENST00000434376 LINC00597Q9H2U6 94 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms