RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 CTSCP53634 463 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 CCL7P80098 99 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 ACVR1Q04771 509 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 DMPKQ09013 629 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 CAMK2BQ13554 666 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 KCNJ11Q14654 390 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 PPP1R7Q15435 360 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 FNBP1LQ5T0N5 605 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 LYPLAL1Q5VWZ2 237 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 AFTPHQ6ULP2 937 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 WASH2PQ6VEQ5 465 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 SERPINA9Q86WD7 417 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 MARCH9Q86YJ5 346 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 OR13J1Q8NGT2 312 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 SLC37A2Q8TED4 501 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 SLCO2A1Q92959 643 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 HDAC10Q969S8 669 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 SH3KBP1Q96B97 665 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 SGF29Q96ES7 293 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 SGSM3Q96HU1 749 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 FAM96AQ9H5X1 160 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 SYNDIG1Q9H7V2 258 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 SARS2Q9NP81 518 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 WASH6PQ9NQA3 447 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 PRDM8Q9NQV8 689 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 PCYOX1Q9UHG3 505 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 DNAJC16Q9Y2G8 782 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 CACNA1GO43497 2377 aa17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 ZNF106Q9H2Y7 1883 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-203ENST00000431127 WDFY3Q8IZQ1 3526 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 IGLV3-16A0A075B6K0 115 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 TRABD2BA6NFA1 517 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 PRR19A6NJB7 356 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 PDZK1P1A8MUH7 402 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 TMX2-CTNND1H3BSU7 103 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 CSO75390 466 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 EML2O95834 649 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 MLNP12872 115 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 ATP1B2P14415 290 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 ALDH4A1P30038 563 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 CASQ1P31415 396 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 ARSDP51689 593 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 ETF1P62495 437 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 PRAMEP78395 509 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 HHEXQ03014 270 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 CLPPQ16740 277 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 ISXQ2M1V0 245 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 BCL7AQ4VC05 210 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 AGAP9Q5VTM2 703 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 ABRAXAS1Q6UWZ7 409 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 CERS6Q6ZMG9 384 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 DET1Q7L5Y6 550 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 MCUQ8NE86 351 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 CPT1BQ92523 772 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 LINC00615Q96LM1 132 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 NRSN2Q9GZP1 204 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 DDX47Q9H0S4 455 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 VPS37BQ9H9H4 285 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 CHRAC1Q9NRG0 131 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 RALYQ9UKM9 306 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 RP1P56715 2156 aa17.09■□□□□ 0.33
CTDSP1-203ENST00000431127 TRBV23OR9-2A0A075B6M9 112 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 A0A1W2PQM1 296 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 TCRBV7S3A2A0A539 114 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 CCDC162PA2VCL2 907 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 MGAT4DA6NG13 374 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 D6RAR5 112 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 CCDC188H7C350 402 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 PPM1DO15297 605 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 CAPNS1P04632 268 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 PPARGP37231 505 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 B4GALNT1Q00973 533 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 ITIH4Q14624 930 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 SYDE1Q6ZW31 735 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 ZNF534Q76KX8 674 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 PIANPQ8IYJ0 282 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 C17orf53Q8N3J3 647 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 OR6P1Q8NGX9 317 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 OR4L1Q8NH43 312 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 ZCCHC14Q8WYQ9 949 aaKnown RBP17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 NXPE2Q96DL1 559 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 ZNF778Q96MU6 729 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 SLC38A3Q99624 504 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 MRM3Q9HC36 420 aaKnown RBP17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 XAB2Q9HCS7 855 aaKnown RBP17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 CPNE7Q9UBL6 633 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 SLC2A6Q9UGQ3 507 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 IGF2RP11717 2491 aa17.08■□□□□ 0.32
CTDSP1-203ENST00000431127 ZZEF1O43149 2961 aa17.07■□□□□ 0.32
CTDSP1-203ENST00000431127 F8W8V4 182 aa17.07■□□□□ 0.32
CTDSP1-203ENST00000431127 QSOX1O00391 747 aa17.07■□□□□ 0.32
CTDSP1-203ENST00000431127 B4GAT1O43505 415 aa17.07■□□□□ 0.32
CTDSP1-203ENST00000431127 AP2A2O94973 939 aa17.07■□□□□ 0.32
CTDSP1-203ENST00000431127 GOT2P00505 430 aaKnown RBP17.07■□□□□ 0.32
CTDSP1-203ENST00000431127 GSTM1P09488 218 aa17.07■□□□□ 0.32
CTDSP1-203ENST00000431127 XRCC1P18887 633 aaPredicted RBP17.07■□□□□ 0.32
CTDSP1-203ENST00000431127 MGAT1P26572 445 aa17.07■□□□□ 0.32
CTDSP1-203ENST00000431127 FOXN2P32314 431 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms