RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 NUDT22Q9BRQ3 303 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 SEMA6CQ9H3T2 930 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 EPB41L1Q9H4G0 881 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 UCK1Q9HA47 277 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 RAB6BQ9NRW1 208 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 POT1Q9NUX5 634 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 NLE1Q9NVX2 485 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-207ENST00000430858 CPNE7Q9UBL6 633 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 CRLS1Q9UJA2 301 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 DRG1Q9Y295 367 aaKnown RBP9.66□□□□□ -0.86
HDAC6-207ENST00000430858 JRKLQ9Y4A0 524 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 LOXL2Q9Y4K0 774 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 SLC30A1Q9Y6M5 507 aa9.66□□□□□ -0.86
HDAC6-207ENST00000430858 ARHGEF17Q96PE2 2063 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-207ENST00000430858 COL27A1Q8IZC6 1860 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-207ENST00000430858 WDFY3Q8IZQ1 3526 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 IGHV5-10-1A0A0J9YXX1 117 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 MROH6A6NGR9 719 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 LILRA5A6NI73 299 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 OR2AG2A6NM03 316 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 CDRT15L2A8MXV6 281 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 CFAP99D6REC4 459 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 ZSCAN12O43309 604 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 DUX1O43812 170 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 POP7O75817 140 aaKnown RBP9.65□□□□□ -0.86
HDAC6-207ENST00000430858 TNFSF15O95150 251 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 VIPP01282 170 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 JMJD7P0C870 316 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 PSMA3P25788 255 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 CXCR5P32302 372 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 HALP42357 657 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 ABCG1P45844 678 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 CTSCP53634 463 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 LIMK2P53671 638 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 TMPRSS15P98073 1019 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 LAMB3Q13751 1172 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 SEPT6Q14141 434 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 POU6F1Q14863 301 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 SEPT7Q16181 437 aaKnown RBP9.65□□□□□ -0.86
HDAC6-207ENST00000430858 SKIDA1Q1XH10 827 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 GPR33Q49SQ1 333 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 NKAIN2Q5VXU1 208 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 TMEM71Q6P5X7 295 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 TMEM220Q6QAJ8 160 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 PPP1R21Q6ZMI0 780 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 ZNF574Q6ZN55 896 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-207ENST00000430858 CLEC14AQ86T13 490 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 ZNF761Q86XN6 746 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-207ENST00000430858 TRIM48Q8IWZ4 208 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 RBM12BQ8IXT5 1001 aaKnown RBP9.65□□□□□ -0.86
HDAC6-207ENST00000430858 NXPE1Q8N323 547 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 OR52K1Q8NGK4 314 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 HNRNPLLQ8WVV9 542 aaKnown RBP9.65□□□□□ -0.86
HDAC6-207ENST00000430858 CCDC97Q96F63 343 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-207ENST00000430858 CDKN2AIPNLQ96HQ2 116 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 LINC00615Q96LM1 132 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-207ENST00000430858 COPS8Q99627 209 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 ZMYND15Q9H091 742 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 SCHIP1Q9P0W5 487 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-207ENST00000430858 PCDHGA7Q9Y5G6 932 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 FREM2Q5SZK8 3169 aa9.65□□□□□ -0.86
HDAC6-207ENST00000430858 USP24Q9UPU5 2620 aa9.65□□□□□ -0.87
HDAC6-207ENST00000430858 APC2O95996 2303 aa9.65□□□□□ -0.87
HDAC6-207ENST00000430858 ACACAQ13085 2346 aa9.65□□□□□ -0.87
HDAC6-207ENST00000430858 AKAP13Q12802 2813 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 SCN8AQ9UQD0 1980 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 HEATR9A2RTY3 570 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 PMS2P1A4D2B8 440 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 MGAT4DA6NG13 374 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 AP3B1O00203 1094 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 APRTP07741 180 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 ZSCAN5DPP0CG00 497 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 THRAP10827 490 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 HGFP14210 728 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 HOXB3P14651 431 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-207ENST00000430858 ETS1P14921 441 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 BRAFP15056 766 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 MSNP26038 577 aaKnown RBP9.64□□□□□ -0.87
HDAC6-207ENST00000430858 RPL10P27635 214 aaKnown RBP9.64□□□□□ -0.87
HDAC6-207ENST00000430858 MC4RP32245 332 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 CSF2RBP32927 897 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 RPL22P35268 128 aaKnown RBP9.64□□□□□ -0.87
HDAC6-207ENST00000430858 SLC19A1P41440 591 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 PPM1FP49593 454 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-207ENST00000430858 DRG2P55039 364 aaKnown RBP9.64□□□□□ -0.87
HDAC6-207ENST00000430858 CFHR1Q03591 330 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 CACNG1Q06432 222 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 COL28A1Q2UY09 1125 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 BCL7AQ4VC05 210 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 ZRANB3Q5FWF4 1079 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 FNBP1LQ5T0N5 605 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 WDR74Q6RFH5 385 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-207ENST00000430858 C19orf48Q6RUI8 117 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 TMEM26Q6ZUK4 368 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 DET1Q7L5Y6 550 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 GSTA5Q7RTV2 222 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 PRUNE1Q86TP1 453 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 REXO1L1PQ8IX06 675 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 RASGEF1CQ8N431 466 aa9.64□□□□□ -0.87
HDAC6-207ENST00000430858 BEND7Q8N7W2 519 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms