RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 TRIM55Q9BYV6 548 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 TWSG1Q9GZX9 223 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 PSMD13Q9UNM6 376 aa16.25■□□□□ 0.19
VARS-216ENST00000428445 LUC7L2Q9Y383 392 aaKnown RBP16.25■□□□□ 0.19
VARS-216ENST00000428445 LRRK2Q5S007 2527 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 MED13Q9UHV7 2174 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 BLACEA4D250 179 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 UGT1A9O60656 530 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 NTRK1P04629 796 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 FGF5P12034 268 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 UGT1A6P19224 532 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 UGT1A1P22309 533 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 UGT1A4P22310 534 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 CASP14P31944 242 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 CAPZBP47756 277 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 UQCRFS1P47985 274 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 DCDC1P59894 354 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 DYNLT1P63172 113 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 TMEM115Q12893 351 aaPredicted RBP16.24■□□□□ 0.19
VARS-216ENST00000428445 CRTC2Q53ET0 693 aaPredicted RBP16.24■□□□□ 0.19
VARS-216ENST00000428445 PWWP2BQ6NUJ5 590 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 ASB18Q6ZVZ8 466 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 TRAPPC5Q8IUR0 188 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 TTC30BQ8N4P2 665 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 GDAP1Q8TB36 358 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 KLHL6Q8WZ60 621 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 RNF25Q96BH1 459 aaPredicted RBP16.24■□□□□ 0.19
VARS-216ENST00000428445 TADA1Q96BN2 335 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 ZNF830Q96NB3 372 aaPredicted RBP16.24■□□□□ 0.19
VARS-216ENST00000428445 TIMM29Q9BSF4 260 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 UGT1A7Q9HAW7 530 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 UGT1A10Q9HAW8 530 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 UGT1A8Q9HAW9 530 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 UVRAGQ9P2Y5 699 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 SAE1Q9UBE0 346 aaPredicted RBP16.24■□□□□ 0.19
VARS-216ENST00000428445 POLHQ9Y253 713 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 HYOU1Q9Y4L1 999 aa16.24■□□□□ 0.19
VARS-216ENST00000428445 MKRN2OSH3BPM6 223 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 DDX3YO15523 660 aaKnown RBP16.23■□□□□ 0.19
VARS-216ENST00000428445 BUD23O43709 281 aaKnown RBP16.23■□□□□ 0.19
VARS-216ENST00000428445 CREG1O75629 220 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 H2AFZP0C0S5 128 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 CCNYL3P0C7X3 344 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 GP1BBP13224 206 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 TNNT1P13805 278 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 IDSP22304 550 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 CHAF1BQ13112 559 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 DNASE1L3Q13609 305 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 IL11RAQ14626 422 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 SLC9A4Q6AI14 798 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 FAM83HQ6ZRV2 1179 aaPredicted RBP16.23■□□□□ 0.19
VARS-216ENST00000428445 H2AFVQ71UI9 128 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 PRSS42Q7Z5A4 293 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 PPP1R3BQ86XI6 285 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 LURAP1LQ8IV03 231 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 FAM26EQ8N5C1 309 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 AVL9Q8NBF6 648 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 SLC25A51Q9H1U9 297 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 LHX9Q9NQ69 397 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 POT1Q9NUX5 634 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 PADI1Q9ULC6 663 aa16.23■□□□□ 0.19
VARS-216ENST00000428445 CFAP20Q9Y6A4 193 aaKnown RBP16.23■□□□□ 0.19
VARS-216ENST00000428445 APOL1O14791 398 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 TOX3O15405 576 aaPredicted RBP16.22■□□□□ 0.19
VARS-216ENST00000428445 VEGFDO43915 354 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 EBLN1P0CF75 366 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 NELFEP18615 380 aaKnown RBP16.22■□□□□ 0.19
VARS-216ENST00000428445 PBLDP30039 288 aaPredicted RBP16.22■□□□□ 0.19
VARS-216ENST00000428445 CHRNA4P43681 627 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 CTSCP53634 463 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 PTPRCAPQ14761 206 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 TCTN3Q6NUS6 607 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 FBXO38Q6PIJ6 1188 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 RFX6Q8HWS3 928 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 SLC25A41Q8N5S1 370 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 RASGEF1AQ8N9B8 481 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 SLC35G2Q8TBE7 412 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.22■□□□□ 0.19
VARS-216ENST00000428445 CTNNBL1Q8WYA6 563 aaPredicted RBP16.22■□□□□ 0.19
VARS-216ENST00000428445 ZDHHC12Q96GR4 267 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 PSMG3-AS1Q96PY0 264 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 MAP3K3Q99759 626 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 MAK16Q9BXY0 300 aaKnown RBP16.22■□□□□ 0.19
VARS-216ENST00000428445 GLOD4Q9HC38 313 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 IFNKQ9P0W0 207 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 SPTBP11277 2137 aa16.22■□□□□ 0.19
VARS-216ENST00000428445 USP9YO00507 2555 aaPredicted RBP16.21■□□□□ 0.19
VARS-216ENST00000428445 USP9XQ93008 2570 aaPredicted RBP16.21■□□□□ 0.19
VARS-216ENST00000428445 ZNF487B1APH4 448 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 GPR89AB7ZAQ6 455 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 RFPL1O75677 317 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 POP7O75817 140 aaKnown RBP16.21■□□□□ 0.19
VARS-216ENST00000428445 NDST3O95803 873 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 GPR89BP0CG08 455 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 PTPN3P26045 913 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 HNRNPH3P31942 346 aaKnown RBP16.21■□□□□ 0.19
VARS-216ENST00000428445 CD68P34810 354 aaPredicted RBP16.21■□□□□ 0.19
VARS-216ENST00000428445 TUBB3Q13509 450 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 NFE2L1Q14494 772 aa16.21■□□□□ 0.19
VARS-216ENST00000428445 CHRNA6Q15825 494 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms