RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 HSD17B2P37059 387 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 CEBPGP53567 150 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 CPSF6Q16630 551 aaKnown RBP eCLIP14.32□□□□□ -0.12
PTPN13-203ENST00000427191 LIN52Q52LA3 116 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 USP30Q70CQ3 517 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 UBE2R2Q712K3 238 aaPredicted RBP14.32□□□□□ -0.12
PTPN13-203ENST00000427191 SLC22A17Q8WUG5 538 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 MYO19Q96H55 970 aa14.32□□□□□ -0.12
PTPN13-203ENST00000427191 WASHC1A8K0Z3 465 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 WASH3PC4AMC7 463 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 M0QX08 132 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 GRM6O15303 877 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 STK16O75716 305 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 ATP5A1P25705 553 aaKnown RBP14.31□□□□□ -0.12
PTPN13-203ENST00000427191 DDX6P26196 483 aaKnown RBP eCLIP14.31□□□□□ -0.12
PTPN13-203ENST00000427191 LCP2Q13094 533 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 LACTB2Q53H82 288 aaPredicted RBP14.31□□□□□ -0.12
PTPN13-203ENST00000427191 DCLRE1AQ6PJP8 1040 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 WASH2PQ6VEQ5 465 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 C3orf67Q6ZVT6 689 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 CLNKQ7Z7G1 428 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 MPP5Q8N3R9 675 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 CREB3L1Q96BA8 519 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 ISM1B1AKI9 464 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 SLC25A52Q3SY17 297 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 FAM76BQ5HYJ3 339 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 CERCAMQ5T4B2 595 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 DENND1CQ8IV53 801 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 TOP6BLQ8N6T0 577 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 RHBDF1Q96CC6 855 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 CLDN11O75508 207 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 LINGO3P0C6S8 592 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 OR3A3P47888 321 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 OR3A2P47893 321 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 SEC23AQ15436 765 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 DNM1P34Q6PK57 102 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 SLC26A9Q7LBE3 791 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 EZH1Q92800 747 aaPredicted RBP14.31□□□□□ -0.12
PTPN13-203ENST00000427191 TCF25Q9BQ70 676 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 COL1A2P08123 1366 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 TEX13CA0A0J9YWL9 993 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 HCN1O60741 890 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 YES1P07947 543 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 DENND6BQ8NEG7 585 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 KAT2AQ92830 837 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 NEUROD4Q9HD90 331 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 WDR37Q9Y2I8 494 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 SASH3O75995 380 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 PRAMEF17Q5VTA0 474 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 TSEN2Q8NCE0 465 aaKnown RBP14.31□□□□□ -0.12
PTPN13-203ENST00000427191 C8orf48Q96LL4 319 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 MFSD14AQ96MC6 490 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 SNRNP25Q9BV90 132 aaKnown RBP14.31□□□□□ -0.12
PTPN13-203ENST00000427191 PCDHB16Q9NRJ7 776 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 FABP12A6NFH5 140 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 RENP00797 406 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 MC4RP32245 332 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 MVKQ03426 396 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 TRPM4Q8TD43 1214 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 KCTD4Q8WVF5 259 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 ZNF558Q96NG5 402 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 SLC39A3Q9BRY0 314 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 RAB11FIP5Q9BXF6 653 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 SMPD4Q9NXE4 827 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 H0Y858 1186 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 SH3BGRLO75368 114 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 PRAMEF1O95521 474 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 GRK6P43250 576 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 ALG10Q5BKT4 473 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 PRAMEF18Q5VWM3 479 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 SYCE2Q6PIF2 218 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 RGL4Q8IZJ4 473 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 PACRGLQ8N7B6 248 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 STYXQ8WUJ0 223 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 SLC44A1Q8WWI5 657 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 AGXT2Q9BYV1 514 aa14.31□□□□□ -0.12
PTPN13-203ENST00000427191 SLC33A1O00400 549 aaPredicted RBP14.3□□□□□ -0.12
PTPN13-203ENST00000427191 NME6O75414 186 aaPredicted RBP14.3□□□□□ -0.12
PTPN13-203ENST00000427191 ZNF823P16415 610 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 LHFPL3Q86UP9 236 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 TAMM41Q96BW9 452 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 BTRCQ9Y297 605 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 TBL1XO60907 577 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 AP2S1P53680 142 aaPredicted RBP14.3□□□□□ -0.12
PTPN13-203ENST00000427191 GTF2BQ00403 316 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 ADGRD2Q7Z7M1 963 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 RIOX2Q8IUF8 465 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 RAVER1Q8IY67 606 aaKnown RBP14.3□□□□□ -0.12
PTPN13-203ENST00000427191 ZNF471Q9BX82 626 aaPredicted RBP14.3□□□□□ -0.12
PTPN13-203ENST00000427191 GRHL1Q9NZI5 618 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 GRK5P34947 590 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 ARL3P36405 182 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 ZFPM1Q8IX07 1006 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 USP12O75317 370 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 C8GP07360 202 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 CMPK1P30085 196 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 SRSF11Q05519 484 aaKnown RBP14.3□□□□□ -0.12
PTPN13-203ENST00000427191 CA9Q16790 459 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 C1orf186Q6ZWK4 172 aa14.3□□□□□ -0.12
PTPN13-203ENST00000427191 AHSA2Q719I0 299 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms