RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 LCP2Q13094 533 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 RBBP7Q16576 425 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 HABP4Q5JVS0 413 aaKnown RBP10.57□□□□□ -0.72
CUX1-205ENST00000425244 KANK2Q63ZY3 851 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 PPP2R2DQ66LE6 453 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 LILRA6Q6PI73 481 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 AFTPHQ6ULP2 937 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 LINGO4Q6UY18 593 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 CCDC149Q6ZUS6 474 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 ADGRD2Q7Z7M1 963 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 SIDT2Q8NBJ9 832 aaKnown RBP10.57□□□□□ -0.72
CUX1-205ENST00000425244 MDGA1Q8NFP4 955 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 CANT1Q8WVQ1 401 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 KIAA1191Q96A73 305 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 TRIB3Q96RU7 358 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 SLC29A1Q99808 456 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 MGME1Q9BQP7 344 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 APOL5Q9BWW9 433 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 NKX2-4Q9H2Z4 354 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 DNAAF2Q9NVR5 837 aaKnown RBP10.57□□□□□ -0.72
CUX1-205ENST00000425244 MAP10Q9P2G4 905 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 NDUFAF1Q9Y375 327 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 TRIOO75962 3097 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 SMIM31A0A1B0GVY4 71 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 FAM149AA5PLN7 773 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 C2orf81A6NN90 581 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 NME4O00746 187 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 INSIG1O15503 277 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 NIPSNAP2O75323 286 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 KLKB1P03952 638 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 TFAP2AP05549 437 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 RHOCP08134 193 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 SLC11A2P49281 568 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 ATP4BP51164 291 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 SUOXP51687 545 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 YBX1P67809 324 aaKnown RBP10.57□□□□□ -0.72
CUX1-205ENST00000425244 NTHL1P78549 312 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 ZXDBP98169 803 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 NADK2Q4G0N4 442 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 ZRANB3Q5FWF4 1079 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 ANKS6Q68DC2 871 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 SPPL2CQ8IUH8 684 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 SDR16C5Q8N3Y7 309 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 METTL25Q8N6Q8 603 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 C12orf76Q8N812 135 aaPredicted RBP10.57□□□□□ -0.72
CUX1-205ENST00000425244 RHEBL1Q8TAI7 183 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 VPS33AQ96AX1 596 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 PRICKLE1Q96MT3 831 aaPredicted RBP10.57□□□□□ -0.72
CUX1-205ENST00000425244 ASB2Q96Q27 587 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 ACOX2Q99424 681 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 SLC30A3Q99726 388 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 C1orf50Q9BV19 199 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 IGFLR1Q9H665 355 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 NLE1Q9NVX2 485 aaPredicted RBP10.57□□□□□ -0.72
CUX1-205ENST00000425244 COMMD8Q9NX08 183 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 HSFX1Q9UBD0 423 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 FKBPLQ9UIM3 349 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 MED16Q9Y2X0 877 aa10.57□□□□□ -0.72
CUX1-205ENST00000425244 A0A1B0GVG6 124 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 TCRBV3S1A0A5B6 114 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 GPR39O43194 453 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 ATP6V1G1O75348 118 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 STC2O76061 302 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 F11P03951 625 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 UGT1A6P19224 532 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 CCR2P41597 374 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 SGSHP51688 502 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 TYSND1Q2T9J0 566 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 PSAPL1Q6NUJ1 521 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 ZBTB49Q6ZSB9 765 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 PIANPQ8IYJ0 282 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 AHI1Q8N157 1196 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 OR2T34Q8NGX1 318 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 OR2T3Q8NH03 318 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 MRPS31Q92665 395 aaKnown RBP10.56□□□□□ -0.72
CUX1-205ENST00000425244 PEX13Q92968 403 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 ROPN1LQ96C74 230 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 TCEAL4Q96EI5 215 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 TRMT2BQ96GJ1 504 aaKnown RBP10.56□□□□□ -0.72
CUX1-205ENST00000425244 PSKH2Q96QS6 385 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 TMEM79Q9BSE2 394 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 MUC3BQ9H195 1237 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 MAGEH1Q9H213 219 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 SLC28A3Q9HAS3 691 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 IL21Q9HBE4 155 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 VCX3AQ9NNX9 186 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 ASAH2Q9NR71 780 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 INTS10Q9NVR2 710 aaKnown RBP10.56□□□□□ -0.72
CUX1-205ENST00000425244 AGO1Q9UL18 857 aaKnown RBP10.56□□□□□ -0.72
CUX1-205ENST00000425244 RWDD3Q9Y3V2 267 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 CPQQ9Y646 472 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 COMMD3-BMI1R4GMX3 469 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 ANAPC1Q9H1A4 1944 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 FGF4P08620 206 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 CES1P23141 567 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 MC4RP32245 332 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 KPNA1P52294 538 aaPredicted RBP10.56□□□□□ -0.72
CUX1-205ENST00000425244 CBX2Q14781 532 aaPredicted RBP10.56□□□□□ -0.72
CUX1-205ENST00000425244 FUT11Q495W5 492 aa10.56□□□□□ -0.72
CUX1-205ENST00000425244 SETMARQ53H47 684 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms