RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 HSDL1Q3SXM5 330 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 CARD16Q5EG05 197 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 FAM78AQ5JUQ0 283 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 FBXO38Q6PIJ6 1188 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 ERN2Q76MJ5 926 aaKnown RBP3.51□□□□□ -1.85
TOP2A-201ENST00000423485 CDKL3Q8IVW4 592 aaPredicted RBP3.51□□□□□ -1.85
TOP2A-201ENST00000423485 GRAMD1CQ8IYS0 662 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 MYO1HQ8N1T3 1032 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 DNAAF1Q8NEP3 725 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 FAM71BQ8TC56 605 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 PROX1Q92786 737 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 ZBTB10Q96DT7 871 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 LINGO1Q96FE5 620 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 CCDC138Q96M89 665 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 CSPG4P5Q96PW8 444 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 STRBPQ96SI9 672 aaKnown RBP3.51□□□□□ -1.85
TOP2A-201ENST00000423485 TBCBQ99426 244 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 LPAR4Q99677 370 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 ADI1Q9BV57 179 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 CARD9Q9H257 536 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 ARNT2Q9HBZ2 717 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 CATSPERZQ9NTU4 200 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 STX18Q9P2W9 335 aaKnown RBP3.51□□□□□ -1.85
TOP2A-201ENST00000423485 EPS15L1Q9UBC2 864 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 TRPC4Q9UBN4 977 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 PTPRDP23468 1912 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 A0A1W2PPW3 197 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 ANXA9O76027 345 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 SNAI1O95863 264 aaPredicted RBP3.51□□□□□ -1.85
TOP2A-201ENST00000423485 SELEP16581 610 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 ACOT2P49753 483 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 RGS7P49802 495 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 HSF2Q03933 536 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 TLE4Q04727 773 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 RING1Q06587 406 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 CKAP4Q07065 602 aaKnown RBP3.51□□□□□ -1.85
TOP2A-201ENST00000423485 FCHO2Q0JRZ9 810 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 RAPSNQ13702 412 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 KNOP1Q1ED39 458 aaKnown RBP3.51□□□□□ -1.85
TOP2A-201ENST00000423485 EXOC3L2Q2M3D2 409 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 PLK5Q496M5 336 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 TMEM63BQ5T3F8 832 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 TANGO2Q6ICL3 276 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 LINC00696Q6ZRV3 163 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 PEX5LQ8IYB4 626 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 CERS5Q8N5B7 392 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 PLD5Q8N7P1 536 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 TMEM102Q8N9M5 508 aaPredicted RBP3.51□□□□□ -1.85
TOP2A-201ENST00000423485 MFSD2AQ8NA29 543 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 CALML6Q8TD86 181 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 AP2M1Q96CW1 435 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 RBM18Q96H35 190 aaKnown RBP3.51□□□□□ -1.85
TOP2A-201ENST00000423485 ACO2Q99798 780 aaKnown RBP3.51□□□□□ -1.85
TOP2A-201ENST00000423485 ZSWIM1Q9BR11 485 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 NIF3L1Q9GZT8 377 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 TMX1Q9H3N1 280 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 KRT84Q9NSB2 600 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 ERGIC3Q9Y282 383 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 STK38LQ9Y2H1 464 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 PRR19A6NJB7 356 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 J3KR12 359 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 CDH16O75309 829 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 NDST3O95803 873 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 MAPTP10636 758 aaKnown RBP3.51□□□□□ -1.85
TOP2A-201ENST00000423485 CYP11B2P19099 503 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 UGT1A6P19224 532 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 ITPKBP27987 946 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 RAD52P43351 418 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 GEMP55040 296 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 SNRPD2P62316 118 aaKnown RBP3.51□□□□□ -1.85
TOP2A-201ENST00000423485 TLE1Q04724 770 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 PTPRCAPQ14761 206 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 ADRM1Q16186 407 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 SHROOM1Q2M3G4 852 aaPredicted RBP3.51□□□□□ -1.85
TOP2A-201ENST00000423485 CYP27C1Q4G0S4 372 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 NEK5Q6P3R8 708 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 ABHD13Q7L211 337 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 PIP4P2Q8N4L2 257 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 CISD2Q8N5K1 135 aaKnown RBP3.51□□□□□ -1.85
TOP2A-201ENST00000423485 OR7D4Q8NG98 312 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 ATL1Q8WXF7 558 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 STARD8Q92502 1023 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 TRAPPC9Q96Q05 1148 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 BTBD9Q96Q07 612 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 LRRC37BQ96QE4 947 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 SEMA3CQ99985 751 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 CBWD1Q9BRT8 395 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 CCM2Q9BSQ5 444 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 POLR3CQ9BUI4 534 aaPredicted RBP3.51□□□□□ -1.85
TOP2A-201ENST00000423485 MRPL1Q9BYD6 325 aaKnown RBP3.51□□□□□ -1.85
TOP2A-201ENST00000423485 KLHL25Q9H0H3 589 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 TMEM168Q9H0V1 697 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 CHODLQ9H9P2 273 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 NLGN3Q9NZ94 848 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 GJD2Q9UKL4 321 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 FAF1Q9UNN5 650 aaPredicted RBP3.51□□□□□ -1.85
TOP2A-201ENST00000423485 ALPK3Q96L96 1907 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 CACNA1IQ9P0X4 2223 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 PROM1O43490 865 aa3.51□□□□□ -1.85
TOP2A-201ENST00000423485 AHCYL1O43865 530 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms