RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 POLBP06746 335 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 GIMD1P0DJR0 217 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 AK4P27144 223 aaPredicted RBP9.15□□□□□ -0.94
PDGFC-202ENST00000422544 PMLP29590 882 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 CTSCP53634 463 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 CTBSQ01459 385 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 FASTKD3Q14CZ7 662 aaKnown RBP9.15□□□□□ -0.94
PDGFC-202ENST00000422544 ELOCQ15369 112 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 LONRF1Q17RB8 773 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 DEFB133Q30KQ1 61 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 PPM1JQ5JR12 505 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 TEX35Q5T0J7 233 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 LYPLAL1Q5VWZ2 237 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 KIAA0930Q6ICG6 404 aaPredicted RBP9.15□□□□□ -0.94
PDGFC-202ENST00000422544 NEPROQ6NW34 567 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 TMEM220Q6QAJ8 160 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 UNC5AQ6ZN44 842 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 CHST15Q7LFX5 561 aaPredicted RBP9.15□□□□□ -0.94
PDGFC-202ENST00000422544 TAF8Q7Z7C8 310 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 NRROSQ86YC3 692 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 CCNJLQ8IV13 435 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 ZNF547Q8IVP9 402 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 ZBED8Q8IZ13 594 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 UNC5BQ8IZJ1 945 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 FSTL5Q8N475 847 aaPredicted RBP9.15□□□□□ -0.94
PDGFC-202ENST00000422544 EID2Q8N6I1 236 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 OTUD6BQ8N6M0 293 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 EFCAB3Q8N7B9 438 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.15□□□□□ -0.94
PDGFC-202ENST00000422544 FBXO36Q8NEA4 188 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.15□□□□□ -0.94
PDGFC-202ENST00000422544 LRRC39Q96DD0 335 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 CAMK1GQ96NX5 476 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 OR2M4Q96R27 311 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 TTC1Q99614 292 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 RTKNQ9BST9 563 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 NAT9Q9BTE0 207 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 ZCCHC2Q9C0B9 1178 aaKnown RBP9.15□□□□□ -0.94
PDGFC-202ENST00000422544 PLAC1Q9HBJ0 212 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 SAYSD1Q9NPB0 183 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 C20orf96Q9NUD7 363 aaPredicted RBP9.15□□□□□ -0.94
PDGFC-202ENST00000422544 ZDHHC18Q9NUE0 388 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 TRNAU1APQ9NX07 287 aaKnown RBP9.15□□□□□ -0.94
PDGFC-202ENST00000422544 SLC23A2Q9UGH3 650 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 BTBD3Q9Y2F9 522 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 ST14Q9Y5Y6 855 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 CSNK1G3Q9Y6M4 447 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 FAM169AQ9Y6X4 670 aa9.15□□□□□ -0.94
PDGFC-202ENST00000422544 ADAMTS9Q9P2N4 1935 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 IGLV3-16A0A075B6K0 115 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 OR2AG2A6NM03 316 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 GPR89AB7ZAQ6 455 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 CFAP99D6REC4 459 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 LMO7DNF2Z398 122 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 EIF3HO15372 352 aaKnown RBP eCLIP9.14□□□□□ -0.95
PDGFC-202ENST00000422544 SGTAO43765 313 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 POP7O75817 140 aaKnown RBP9.14□□□□□ -0.95
PDGFC-202ENST00000422544 TTC4O95801 387 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 ANXA6P08133 673 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 F7P08709 466 aaPredicted RBP9.14□□□□□ -0.95
PDGFC-202ENST00000422544 GPR89BP0CG08 455 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 ERVK-10P10266 1014 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 RALBP11234 206 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 ACP5P13686 325 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 ATP1B2P14415 290 aaPredicted RBP9.14□□□□□ -0.95
PDGFC-202ENST00000422544 CARSP49589 748 aaKnown RBP9.14□□□□□ -0.95
PDGFC-202ENST00000422544 ILF3Q12906 894 aaKnown RBP eCLIP9.14□□□□□ -0.95
PDGFC-202ENST00000422544 CBLBQ13191 982 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 THOC5Q13769 683 aaKnown RBP9.14□□□□□ -0.95
PDGFC-202ENST00000422544 HLTFQ14527 1009 aaKnown RBP eCLIP9.14□□□□□ -0.95
PDGFC-202ENST00000422544 ITIH4Q14624 930 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 CRYMQ14894 314 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 PLA2G4EQ3MJ16 856 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 HSP90AA5PQ58FG0 334 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 SPANXN3Q5MJ09 141 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 MRNIPQ6NTE8 343 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 SLC30A9Q6PML9 568 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 CERS6Q6ZMG9 384 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 SDCCAG8Q86SQ7 713 aaPredicted RBP9.14□□□□□ -0.95
PDGFC-202ENST00000422544 LRRTM4Q86VH4 590 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 CCDC25Q86WR0 208 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 GKN2Q86XP6 184 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 TRAPPC5Q8IUR0 188 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 NAXDQ8IW45 347 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 IFT20Q8IY31 132 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 CLDN19Q8N6F1 224 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 BEND7Q8N7W2 519 aaPredicted RBP9.14□□□□□ -0.95
PDGFC-202ENST00000422544 FAM46DQ8NEK8 389 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 GPBAR1Q8TDU6 330 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 RHBDD1Q8TEB9 315 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 PYROXD1Q8WU10 500 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 HEXDCQ8WVB3 486 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 TMEM121BQ9BXQ6 578 aaPredicted RBP9.14□□□□□ -0.95
PDGFC-202ENST00000422544 GSDMCQ9BYG8 508 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 PPANQ9NQ55 473 aaKnown RBP9.14□□□□□ -0.95
PDGFC-202ENST00000422544 SPATS2LQ9NUQ6 558 aaKnown RBP9.14□□□□□ -0.95
PDGFC-202ENST00000422544 CDV3Q9UKY7 258 aaKnown RBP9.14□□□□□ -0.95
PDGFC-202ENST00000422544 DOLKQ9UPQ8 538 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 KCNK6Q9Y257 313 aa9.14□□□□□ -0.95
PDGFC-202ENST00000422544 PRSS21Q9Y6M0 314 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms