RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 KLHDC10Q6PID8 442 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 ADGRD1Q6QNK2 874 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 CAND1Q86VP6 1230 aaKnown RBP9.64□□□□□ -0.87
CMSS1-201ENST00000421999 DSELQ8IZU8 1212 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 POU5F2Q8N7G0 328 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 TRMT2BQ96GJ1 504 aaKnown RBP9.64□□□□□ -0.87
CMSS1-201ENST00000421999 SIGLEC10Q96LC7 697 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 TCF12Q99081 682 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 SH3GL1Q99961 368 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 AIF1LQ9BQI0 150 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 AARSD1Q9BTE6 412 aaKnown RBP9.64□□□□□ -0.87
CMSS1-201ENST00000421999 MECRQ9BV79 373 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 SRMSQ9H3Y6 488 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 PCDH12Q9NPG4 1184 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 GDE1Q9NZC3 331 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 LZTS1Q9Y250 596 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 NDUFAF1Q9Y375 327 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 ACTL7BQ9Y614 415 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 TEX264Q9Y6I9 313 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 CXorf49A8MYA2 514 aaPredicted RBP9.64□□□□□ -0.87
CMSS1-201ENST00000421999 LBPP18428 481 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 ATP6V1C1P21283 382 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 RPL10P27635 214 aaKnown RBP9.64□□□□□ -0.87
CMSS1-201ENST00000421999 CD70P32970 193 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 GPX6P59796 221 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 ELAVL3Q14576 367 aaKnown RBP9.64□□□□□ -0.87
CMSS1-201ENST00000421999 LRRC23Q53EV4 343 aaPredicted RBP9.64□□□□□ -0.87
CMSS1-201ENST00000421999 WDR45BQ5MNZ6 344 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 TRAF7Q6Q0C0 670 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 KBTBD6Q86V97 674 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 CNTD1Q8N815 330 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 ESAMQ96AP7 390 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 EME1Q96AY2 570 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 NXNL1Q96CM4 212 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 KLHDC7BQ96G42 594 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 TTLL2Q9BWV7 592 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 KCNK6Q9Y257 313 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 CFAP20Q9Y6A4 193 aaKnown RBP9.64□□□□□ -0.87
CMSS1-201ENST00000421999 CCT8L1PA6NM43 557 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 NTSR1P30989 418 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 HPCAL1P37235 193 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 HSPA7P48741 367 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 CLCNKAP51800 687 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 BST1Q10588 318 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 SNX20Q7Z614 316 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 DEFB123Q8N688 67 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 TMCO5AQ8N6Q1 288 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 ITFG1Q8TB96 612 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 PIWIL2Q8TC59 973 aaKnown RBP9.64□□□□□ -0.87
CMSS1-201ENST00000421999 CNDP1Q96KN2 507 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 CAAP1Q9H8G2 361 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 ACSS2Q9NR19 701 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 OR10H1Q9Y4A9 318 aa9.64□□□□□ -0.87
CMSS1-201ENST00000421999 ASGR2P07307 311 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 IVDP26440 423 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 TAS2R39P59534 338 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 PTCRAQ6ISU1 281 aaPredicted RBP9.63□□□□□ -0.87
CMSS1-201ENST00000421999 TRIM74Q86UV6 250 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 TNIP2Q8NFZ5 429 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 DNAJC11Q9NVH1 559 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 RPS6KB2Q9UBS0 482 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 WARS2Q9UGM6 360 aaKnown RBP9.63□□□□□ -0.87
CMSS1-201ENST00000421999 C16orf96A6NNT2 1141 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 SERPINI2O75830 405 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 KLKB1P03952 638 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 HMGA1P17096 107 aaKnown RBP9.63□□□□□ -0.87
CMSS1-201ENST00000421999 VIPR1P32241 457 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 CAPZA2P47755 286 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 SLC16A1P53985 500 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 TNK2Q07912 1038 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 ZNF460Q14592 562 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 GPR33Q49SQ1 333 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 RIPOR1Q6ZS17 1223 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 CHSY3Q70JA7 882 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 ERN2Q76MJ5 926 aaKnown RBP9.63□□□□□ -0.87
CMSS1-201ENST00000421999 RNF148Q8N7C7 305 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 PHC3Q8NDX5 983 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 SCAMP4Q969E2 229 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 NT5C3BQ969T7 300 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 SLC39A13Q96H72 371 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 C8orf33Q9H7E9 229 aaPredicted RBP9.63□□□□□ -0.87
CMSS1-201ENST00000421999 SLCO1B3Q9NPD5 702 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 CCDC177Q9NQR7 707 aaPredicted RBP9.63□□□□□ -0.87
CMSS1-201ENST00000421999 HSFX1Q9UBD0 423 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 GPN3Q9UHW5 284 aaPredicted RBP9.63□□□□□ -0.87
CMSS1-201ENST00000421999 HAO1Q9UJM8 370 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 PRKAB1Q9Y478 270 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 LOC285556D6RIA3 1793 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 CFAP73A6NFT4 308 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 POP7O75817 140 aaKnown RBP9.63□□□□□ -0.87
CMSS1-201ENST00000421999 SEC24DO94855 1032 aaPredicted RBP9.63□□□□□ -0.87
CMSS1-201ENST00000421999 F11P03951 625 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 GSTM1P09488 218 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 ZNF8P17098 575 aaPredicted RBP9.63□□□□□ -0.87
CMSS1-201ENST00000421999 CDH2P19022 906 aaPredicted RBP9.63□□□□□ -0.87
CMSS1-201ENST00000421999 SLC1A2P43004 574 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 LIMK2P53671 638 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 TCTN1Q2MV58 587 aa9.63□□□□□ -0.87
CMSS1-201ENST00000421999 KIAA0930Q6ICG6 404 aaPredicted RBP9.63□□□□□ -0.87
CMSS1-201ENST00000421999 HBEGFQ99075 208 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms