RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 CCDC38Q502W7 563 aa25.97■■□□□ 1.75
CDK9-202ENST00000421939 FNBP1LQ5T0N5 605 aa25.97■■□□□ 1.75
CDK9-202ENST00000421939 DET1Q7L5Y6 550 aa25.97■■□□□ 1.75
CDK9-202ENST00000421939 AMZ2Q86W34 360 aa25.97■■□□□ 1.75
CDK9-202ENST00000421939 WDR36Q8NI36 951 aaKnown RBP25.97■■□□□ 1.75
CDK9-202ENST00000421939 DCUN1D1Q96GG9 259 aa25.97■■□□□ 1.75
CDK9-202ENST00000421939 OSBPL9Q96SU4 736 aa25.97■■□□□ 1.75
CDK9-202ENST00000421939 FAM96AQ9H5X1 160 aa25.97■■□□□ 1.75
CDK9-202ENST00000421939 RDH14Q9HBH5 336 aa25.97■■□□□ 1.75
CDK9-202ENST00000421939 CASS4Q9NQ75 786 aa25.97■■□□□ 1.75
CDK9-202ENST00000421939 CPNE7Q9UBL6 633 aa25.97■■□□□ 1.75
CDK9-202ENST00000421939 PCDHGA8Q9Y5G5 932 aa25.97■■□□□ 1.75
CDK9-202ENST00000421939 CCDC78A2IDD5 438 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 USP27XA6NNY8 438 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 POP7O75817 140 aaKnown RBP25.96■■□□□ 1.75
CDK9-202ENST00000421939 IDSP22304 550 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 PSMA3P25788 255 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 CD1CP29017 333 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 UBE2IP63279 158 aaKnown RBP25.96■■□□□ 1.75
CDK9-202ENST00000421939 GPLD1P80108 840 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 BASP1P80723 227 aaKnown RBP25.96■■□□□ 1.75
CDK9-202ENST00000421939 ZFP36L1Q07352 338 aaKnown RBP25.96■■□□□ 1.75
CDK9-202ENST00000421939 DMPKQ09013 629 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 TBC1D25Q3MII6 688 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 AGAP9Q5VTM2 703 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 WASH2PQ6VEQ5 465 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 TMPRSS9Q7Z410 1059 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 PIM3Q86V86 326 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 SLITRK4Q8IW52 837 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 COG1Q8WTW3 980 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 SH3KBP1Q96B97 665 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 COPS8Q99627 209 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 NUDT22Q9BRQ3 303 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 WASH6PQ9NQA3 447 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 SCHIP1Q9P0W5 487 aaPredicted RBP25.96■■□□□ 1.75
CDK9-202ENST00000421939 DNMT3AQ9Y6K1 912 aaPredicted RBP25.96■■□□□ 1.75
CDK9-202ENST00000421939 KIF26BQ2KJY2 2108 aa25.96■■□□□ 1.75
CDK9-202ENST00000421939 HEATR9A2RTY3 570 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 RALBP11234 206 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 EIF3IQ13347 325 aaKnown RBP25.95■■□□□ 1.74
CDK9-202ENST00000421939 LAMB3Q13751 1172 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 SKIDA1Q1XH10 827 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 BCL7AQ4VC05 210 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 ZRANB3Q5FWF4 1079 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 NKAIN2Q5VXU1 208 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 IGF2-ASQ6U949 168 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 ABRAXAS1Q6UWZ7 409 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 MICALCLQ6ZW33 695 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 USP53Q70EK8 1073 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 HEXDCQ8WVB3 486 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 SGF29Q96ES7 293 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 CDKN2AIPNLQ96HQ2 116 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 RANBP9Q96S59 729 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 AP1M1Q9BXS5 423 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 SMARCAL1Q9NZC9 954 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 SNX12Q9UMY4 172 aa25.95■■□□□ 1.74
CDK9-202ENST00000421939 LAMA5O15230 3695 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 TRBV5-4A0A0C4DH59 114 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 PMS2P1A4D2B8 440 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 CFAP99D6REC4 459 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 TLX3O43711 291 aaPredicted RBP25.94■■□□□ 1.74
CDK9-202ENST00000421939 BRAFP15056 766 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 RPL10P27635 214 aaKnown RBP25.94■■□□□ 1.74
CDK9-202ENST00000421939 PBLDP30039 288 aaPredicted RBP25.94■■□□□ 1.74
CDK9-202ENST00000421939 CSF2RBP32927 897 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 ARSDP51689 593 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 DRG2P55039 364 aaKnown RBP25.94■■□□□ 1.74
CDK9-202ENST00000421939 CACNG1Q06432 222 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 SQSTM1Q13501 440 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 PHF19Q5T6S3 580 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 TTC27Q6P3X3 843 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 FOXR1Q6PIV2 292 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 RAB11FIP2Q7L804 512 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 TRIM48Q8IWZ4 208 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 BEND7Q8N7W2 519 aaPredicted RBP25.94■■□□□ 1.74
CDK9-202ENST00000421939 OR10G6Q8NH81 332 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 SNIP1Q8TAD8 396 aaKnown RBP25.94■■□□□ 1.74
CDK9-202ENST00000421939 MAGOHBQ96A72 148 aaKnown RBP25.94■■□□□ 1.74
CDK9-202ENST00000421939 CCDC97Q96F63 343 aaPredicted RBP25.94■■□□□ 1.74
CDK9-202ENST00000421939 ZMYND15Q9H091 742 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 SEMA6CQ9H3T2 930 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 ASCL3Q9NQ33 180 aa25.94■■□□□ 1.74
CDK9-202ENST00000421939 CES2O00748 559 aa25.93■■□□□ 1.74
CDK9-202ENST00000421939 DUX1O43812 170 aa25.93■■□□□ 1.74
CDK9-202ENST00000421939 XRCC1P18887 633 aaPredicted RBP25.93■■□□□ 1.74
CDK9-202ENST00000421939 ACRV1P26436 265 aa25.93■■□□□ 1.74
CDK9-202ENST00000421939 RBMS1P29558 406 aaKnown RBP25.93■■□□□ 1.74
CDK9-202ENST00000421939 CDKN1CP49918 316 aaPredicted RBP25.93■■□□□ 1.74
CDK9-202ENST00000421939 CYP1B1Q16678 543 aa25.93■■□□□ 1.74
CDK9-202ENST00000421939 FAM83HQ6ZRV2 1179 aaPredicted RBP25.93■■□□□ 1.74
CDK9-202ENST00000421939 SERPINA9Q86WD7 417 aa25.93■■□□□ 1.74
CDK9-202ENST00000421939 ACTRT1Q8TDG2 376 aa25.93■■□□□ 1.74
CDK9-202ENST00000421939 NAT14Q8WUY8 206 aa25.93■■□□□ 1.74
CDK9-202ENST00000421939 FGF11Q92914 225 aa25.93■■□□□ 1.74
CDK9-202ENST00000421939 PRR11Q96HE9 360 aaPredicted RBP25.93■■□□□ 1.74
CDK9-202ENST00000421939 AHCYL2Q96HN2 611 aaKnown RBP25.93■■□□□ 1.74
CDK9-202ENST00000421939 ZNF578Q96N58 590 aaPredicted RBP25.93■■□□□ 1.74
CDK9-202ENST00000421939 DPYSL5Q9BPU6 564 aa25.93■■□□□ 1.74
CDK9-202ENST00000421939 LDHAL6BQ9BYZ2 381 aaPredicted RBP25.93■■□□□ 1.74
CDK9-202ENST00000421939 ZDHHC3Q9NYG2 299 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms