RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 TREX1Q9NSU2 369 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 FAM8A1Q9UBU6 413 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 TBC1D29Q9UFV1 150 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 TRBV5-4A0A0C4DH59 114 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 LY6G6EA0A0G2JKS1 128 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 RHPN2P1A8MT19 583 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 PDZK1P1A8MUH7 402 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 SMAPO00193 183 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 CD3EAPO15446 510 aaKnown RBP15.51■□□□□ 0.07
BRAT1-202ENST00000421712 NOBOXO60393 691 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 TRIM16O95361 564 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 CDK4P11802 303 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 RPL21P46778 160 aaKnown RBP15.51■□□□□ 0.07
BRAT1-202ENST00000421712 MAZP56270 477 aaKnown RBP15.51■□□□□ 0.07
BRAT1-202ENST00000421712 B4GALNT1Q00973 533 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 E2F1Q01094 437 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 DHX9Q08211 1270 aaKnown RBP15.51■□□□□ 0.07
BRAT1-202ENST00000421712 CALCOCO2Q13137 446 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 AARS2Q5JTZ9 985 aaKnown RBP15.51■□□□□ 0.07
BRAT1-202ENST00000421712 HIBCHQ6NVY1 386 aaPredicted RBP15.51■□□□□ 0.07
BRAT1-202ENST00000421712 CERS6Q6ZMG9 384 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 ZNF572Q7Z3I7 529 aaPredicted RBP15.51■□□□□ 0.07
BRAT1-202ENST00000421712 PDIK1LQ8N165 341 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 CHCHD4Q8N4Q1 142 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 GPR156Q8NFN8 814 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 OR6C4Q8NGE1 309 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 MAPK15Q8TD08 544 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 PATE1Q8WXA2 126 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 STAMBPL1Q96FJ0 436 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 ERP44Q9BS26 406 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 SYNDIG1Q9H7V2 258 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 PRDM8Q9NQV8 689 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 LRIT1Q9P2V4 623 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 MRFAP1Q9Y605 127 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 DNMT3AQ9Y6K1 912 aaPredicted RBP15.51■□□□□ 0.07
BRAT1-202ENST00000421712 RPS6KL1Q9Y6S9 549 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 U3KQA8 63 aa15.51■□□□□ 0.07
BRAT1-202ENST00000421712 ZFC3H1O60293 1989 aaKnown RBP15.51■□□□□ 0.07
BRAT1-202ENST00000421712 FAM237BA0A1B0GVD1 139 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 GOLGA8KD6RF30 607 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 GOLGA8TH3BQL2 631 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 KCNJ13O60928 360 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 SEC31AO94979 1220 aaKnown RBP15.5■□□□□ 0.07
BRAT1-202ENST00000421712 SLC2A4P14672 509 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 GLB1P16278 677 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 IDSP22304 550 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 RPL10P27635 214 aaKnown RBP15.5■□□□□ 0.07
BRAT1-202ENST00000421712 NSG1P42857 185 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 PPM1FP49593 454 aaPredicted RBP15.5■□□□□ 0.07
BRAT1-202ENST00000421712 ARL4CP56559 192 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 THOC5Q13769 683 aaKnown RBP15.5■□□□□ 0.07
BRAT1-202ENST00000421712 ITIH4Q14624 930 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 ANKRD20A4Q4UJ75 823 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 HP1BP3Q5SSJ5 553 aaPredicted RBP15.5■□□□□ 0.07
BRAT1-202ENST00000421712 ARMC3Q5W041 872 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 MRNIPQ6NTE8 343 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 SDCCAG8Q86SQ7 713 aaPredicted RBP15.5■□□□□ 0.07
BRAT1-202ENST00000421712 LDB1Q86U70 411 aaPredicted RBP15.5■□□□□ 0.07
BRAT1-202ENST00000421712 NAGSQ8N159 534 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 ARL14Q8N4G2 192 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 CLDN19Q8N6F1 224 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 Q8N9G6 341 aaPredicted RBP15.5■□□□□ 0.07
BRAT1-202ENST00000421712 ADAMTS14Q8WXS8 1223 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 CCDC74AQ96AQ1 378 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 CCDC97Q96F63 343 aaPredicted RBP15.5■□□□□ 0.07
BRAT1-202ENST00000421712 TRIM56Q9BRZ2 755 aaKnown RBP15.5■□□□□ 0.07
BRAT1-202ENST00000421712 RAB17Q9H0T7 212 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 VPS37BQ9H9H4 285 aa15.5■□□□□ 0.07
BRAT1-202ENST00000421712 SPTBN2O15020 2390 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 MED19A0JLT2 244 aaPredicted RBP15.49■□□□□ 0.07
BRAT1-202ENST00000421712 CTAGE15A4D2H0 777 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 F8W8V4 182 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 PFDN6O15212 129 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 HYAL3O43820 417 aaPredicted RBP15.49■□□□□ 0.07
BRAT1-202ENST00000421712 NDUFS3O75489 264 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 BANF1O75531 89 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 EML2O95834 649 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 POLBP06746 335 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 GP1BAP07359 652 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 ADRB1P08588 477 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 CTAGE8P0CG41 777 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 F3P13726 295 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 MAGEA3P43357 314 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 TTPAP49638 278 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 CLCNKAP51800 687 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 DRG2P55039 364 aaKnown RBP15.49■□□□□ 0.07
BRAT1-202ENST00000421712 NFE2L1Q14494 772 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 HLTFQ14527 1009 aaKnown RBP eCLIP15.49■□□□□ 0.07
BRAT1-202ENST00000421712 HIF1AQ16665 826 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 BCL7AQ4VC05 210 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 PERM1Q5SV97 790 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 C8orf74Q6P047 294 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 C11orf96Q7Z7L8 435 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 CTAGE6Q86UF2 777 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 TRIM48Q8IWZ4 208 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 CTAGE4Q8IX94 777 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 CFAP206Q8IYR0 622 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 SGSM3Q96HU1 749 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 SIGLEC10Q96LC7 697 aa15.49■□□□□ 0.07
BRAT1-202ENST00000421712 PWWP2AQ96N64 755 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms