RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 THOP1P52888 689 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 GDF10P55107 478 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 RGS1Q08116 209 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 TCEA2Q15560 299 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 ZNF697Q5TEC3 545 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 APOBEC3HQ6NTF7 200 aaKnown RBP12.24□□□□□ -0.45
CLCN4-203ENST00000421085 EGFL6Q8IUX8 553 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 PCSK9Q8NBP7 692 aaKnown RBP12.24□□□□□ -0.45
CLCN4-203ENST00000421085 OR4K2Q8NGD2 314 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 OR5K1Q8NHB7 308 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 HEXDCQ8WVB3 486 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 XAGE5Q8WWM1 108 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 HSD3B7Q9H2F3 369 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 EQTNQ9NQ60 294 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 CKLFQ9UBR5 152 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 TRPV2Q9Y5S1 764 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 GTPBP1O00178 669 aaKnown RBP12.24□□□□□ -0.45
CLCN4-203ENST00000421085 QSOX1O00391 747 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 CELF2O95319 508 aaKnown RBP12.24□□□□□ -0.45
CLCN4-203ENST00000421085 DNTTP04053 509 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 YES1P07947 543 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 PDHA2P29803 388 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 ADCYAP1R1P41586 468 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 HECTD3Q5T447 861 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 GPR153Q6NV75 609 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 FAM83AQ86UY5 434 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 LSM14AQ8ND56 463 aaKnown RBP12.24□□□□□ -0.45
CLCN4-203ENST00000421085 MKL1Q969V6 931 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 KCNN2Q9H2S1 579 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 LIN28AQ9H9Z2 209 aaKnown RBP12.24□□□□□ -0.45
CLCN4-203ENST00000421085 SLC22A2O15244 555 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 AMHP03971 560 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 PSEN2P49810 448 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 PTGES3Q15185 160 aaKnown RBP12.23□□□□□ -0.45
CLCN4-203ENST00000421085 CELF3Q5SZQ8 465 aaKnown RBP12.23□□□□□ -0.45
CLCN4-203ENST00000421085 CHST15Q7LFX5 561 aaPredicted RBP12.23□□□□□ -0.45
CLCN4-203ENST00000421085 DEFB128Q7Z7B8 93 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 ADGRG2Q8IZP9 1017 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 SLC4A11Q8NBS3 891 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 CXorf40AQ8TE69 158 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 IPCEF1Q8WWN9 437 aaPredicted RBP12.23□□□□□ -0.45
CLCN4-203ENST00000421085 CLDN9O95484 217 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 GTF2H2Q13888 395 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 NPTX1Q15818 432 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 PLEKHG6Q3KR16 790 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 GTF2H2CQ6P1K8 395 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 ZNF615Q8N8J6 731 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 C11orf65Q8NCR3 313 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 PPP1R13LQ8WUF5 828 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 ZFP3Q96NJ6 502 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 ACAT2Q9BWD1 397 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 AASSQ9UDR5 926 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 OAZ3Q9UMX2 235 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 VBP1P61758 197 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 TOMM20Q15388 145 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 WSCD2Q2TBF2 565 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 SDHAF4Q5VUM1 108 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 NIPAL1Q6NVV3 410 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 PDSS2Q86YH6 399 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 SNX33Q8WV41 574 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 KAT2AQ92830 837 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 UFD1Q92890 307 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 HIPK3Q9H422 1215 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 RBM7Q9Y580 266 aaKnown RBP12.23□□□□□ -0.45
CLCN4-203ENST00000421085 ITM2AO43736 263 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 GJB1P08034 283 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 XRCC1P18887 633 aaPredicted RBP12.23□□□□□ -0.45
CLCN4-203ENST00000421085 ACADLP28330 430 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 C9orf64Q5T6V5 341 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 ANKS1BQ7Z6G8 1248 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 TMEM110Q86TL2 294 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 UNC5BQ8IZJ1 945 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 TSEN15Q8WW01 171 aaKnown RBP12.23□□□□□ -0.45
CLCN4-203ENST00000421085 ZNF317Q96PQ6 595 aaPredicted RBP12.23□□□□□ -0.45
CLCN4-203ENST00000421085 SLC6A15Q9H2J7 730 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 C3orf14Q9HBI5 128 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 PLOD2O00469 737 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 OR4F21O95013 312 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 ITIH1P19827 911 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 S100GP29377 79 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 RPL9P32969 192 aaKnown RBP12.23□□□□□ -0.45
CLCN4-203ENST00000421085 ADRA1BP35368 520 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 HSPA7P48741 367 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 AP2S1P53680 142 aaPredicted RBP12.23□□□□□ -0.45
CLCN4-203ENST00000421085 ZNF567Q8N184 647 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 NDRG1Q92597 394 aaKnown RBP12.23□□□□□ -0.45
CLCN4-203ENST00000421085 FAM129BQ96TA1 746 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 RCOR3Q9P2K3 495 aaPredicted RBP12.23□□□□□ -0.45
CLCN4-203ENST00000421085 ABCG2Q9UNQ0 655 aa12.23□□□□□ -0.45
CLCN4-203ENST00000421085 CPSF4LA6NMK7 179 aaKnown RBP12.22□□□□□ -0.45
CLCN4-203ENST00000421085 MCIDASD6RGH6 385 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 GABBR2O75899 941 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 AP1S2P56377 157 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 CSTF1Q05048 431 aaKnown RBP12.22□□□□□ -0.45
CLCN4-203ENST00000421085 C2orf80Q0P641 193 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 DAG1Q14118 895 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 CYP1B1Q16678 543 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 SYT16Q17RD7 645 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 TMPRSS11BQ86T26 416 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 ZNF248Q8NDW4 579 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms