RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 RASGEF1AQ8N9B8 481 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 RCBTB1Q8NDN9 531 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 USP7Q93009 1102 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 TMEM121Q9BTD3 319 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 ZMYND15Q9H091 742 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 EPB41L1Q9H4G0 881 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 UCK1Q9HA47 277 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 WASH6PQ9NQA3 447 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.21■□□□□ 0.19
LINC00404-201ENST00000418660 TMEM9Q9P0T7 183 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 SCHIP1Q9P0W5 487 aaPredicted RBP16.21■□□□□ 0.19
LINC00404-201ENST00000418660 KCTD3Q9Y597 815 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 DNMT3AQ9Y6K1 912 aaPredicted RBP16.21■□□□□ 0.19
LINC00404-201ENST00000418660 ZFYVE26Q68DK2 2539 aa16.21■□□□□ 0.19
LINC00404-201ENST00000418660 LILRA5A6NI73 299 aa16.2■□□□□ 0.18
LINC00404-201ENST00000418660 PSMD3O43242 534 aa16.2■□□□□ 0.18
LINC00404-201ENST00000418660 POP7O75817 140 aaKnown RBP16.2■□□□□ 0.18
LINC00404-201ENST00000418660 SRP72O76094 671 aaKnown RBP16.2■□□□□ 0.18
LINC00404-201ENST00000418660 VIPP01282 170 aa16.2■□□□□ 0.18
LINC00404-201ENST00000418660 CCL4P13236 92 aa16.2■□□□□ 0.18
LINC00404-201ENST00000418660 MPSTP25325 297 aa16.2■□□□□ 0.18
LINC00404-201ENST00000418660 GDF10P55107 478 aa16.2■□□□□ 0.18
LINC00404-201ENST00000418660 P3H1Q32P28 736 aa16.2■□□□□ 0.18
LINC00404-201ENST00000418660 SOWAHCQ53LP3 525 aaPredicted RBP16.2■□□□□ 0.18
LINC00404-201ENST00000418660 TMEM164Q5U3C3 297 aa16.2■□□□□ 0.18
LINC00404-201ENST00000418660 ZNF662Q6ZS27 426 aa16.2■□□□□ 0.18
LINC00404-201ENST00000418660 AMZ2Q86W34 360 aa16.2■□□□□ 0.18
LINC00404-201ENST00000418660 AGBL5Q8NDL9 886 aa16.2■□□□□ 0.18
LINC00404-201ENST00000418660 ZNF514Q96K75 400 aaPredicted RBP16.2■□□□□ 0.18
LINC00404-201ENST00000418660 FRMD8P1Q9BZ68 369 aaPredicted RBP16.2■□□□□ 0.18
LINC00404-201ENST00000418660 ASB8Q9H765 288 aa16.2■□□□□ 0.18
LINC00404-201ENST00000418660 LRRC40Q9H9A6 602 aa16.2■□□□□ 0.18
LINC00404-201ENST00000418660 ZNF624Q9P2J8 865 aaPredicted RBP16.2■□□□□ 0.18
LINC00404-201ENST00000418660 FKBPLQ9UIM3 349 aa16.2■□□□□ 0.18
LINC00404-201ENST00000418660 PRAMEF33A0A0G2JMD5 474 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 C9orf172C9J069 976 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 PRAMEF10O60809 474 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 FGF3P11487 239 aaPredicted RBP16.19■□□□□ 0.18
LINC00404-201ENST00000418660 BRAFP15056 766 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 MSH3P20585 1137 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 RPL10P27635 214 aaKnown RBP16.19■□□□□ 0.18
LINC00404-201ENST00000418660 STIP1P31948 543 aaKnown RBP16.19■□□□□ 0.18
LINC00404-201ENST00000418660 CSTF2P33240 577 aaKnown RBP eCLIP16.19■□□□□ 0.18
LINC00404-201ENST00000418660 HADHAP40939 763 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 SLC19A1P41440 591 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 ZNF140P52738 457 aaPredicted RBP16.19■□□□□ 0.18
LINC00404-201ENST00000418660 CTSCP53634 463 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 XIAPP98170 497 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 DMPKQ09013 629 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 SEPT7Q16181 437 aaKnown RBP16.19■□□□□ 0.18
LINC00404-201ENST00000418660 LONRF2Q1L5Z9 754 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 MEI1Q5TIA1 1274 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 TMEM220Q6QAJ8 160 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 SLC13A5Q86YT5 568 aaPredicted RBP16.19■□□□□ 0.18
LINC00404-201ENST00000418660 LRRC8AQ8IWT6 810 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 TRIM48Q8IWZ4 208 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 NCSTNQ92542 709 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 RTP4Q96DX8 246 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 UBL7Q96S82 380 aaPredicted RBP16.19■□□□□ 0.18
LINC00404-201ENST00000418660 TBC1D10AQ9BXI6 508 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 CPNE5Q9HCH3 593 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 POT1Q9NUX5 634 aa16.19■□□□□ 0.18
LINC00404-201ENST00000418660 TEX51A0A1B0GUA7 166 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 OR2AG2A6NM03 316 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 AGAP14A8MT82 685 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 LDB2O43679 373 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 LIASO43766 372 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 CCDC175P0C221 793 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 LIPCP11150 499 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 CD82P27701 267 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 AKT1P31749 480 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 HALP42357 657 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 MAPK9P45984 424 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 DRG2P55039 364 aaKnown RBP16.18■□□□□ 0.18
LINC00404-201ENST00000418660 VAC14Q08AM6 782 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 RPS6KA1Q15418 735 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 TMEM26Q6ZUK4 368 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 ARHGAP22Q7Z5H3 698 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 RBM12BQ8IXT5 1001 aaKnown RBP16.18■□□□□ 0.18
LINC00404-201ENST00000418660 OR13C4Q8NGS5 318 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 SNRNP27Q8WVK2 155 aaKnown RBP16.18■□□□□ 0.18
LINC00404-201ENST00000418660 ATG4AQ8WYN0 398 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 TAAR9Q96RI9 348 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 FOXJ2Q9P0K8 574 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 PCDHGA3Q9Y5H0 932 aa16.18■□□□□ 0.18
LINC00404-201ENST00000418660 KLHL33A6NCF5 533 aa16.17■□□□□ 0.18
LINC00404-201ENST00000418660 OR52A4PA6NMU1 304 aa16.17■□□□□ 0.18
LINC00404-201ENST00000418660 AP2A1O95782 977 aa16.17■□□□□ 0.18
LINC00404-201ENST00000418660 TMPRSS15P98073 1019 aa16.17■□□□□ 0.18
LINC00404-201ENST00000418660 CLCA4Q14CN2 919 aa16.17■□□□□ 0.18
LINC00404-201ENST00000418660 OASLQ15646 514 aaKnown RBP16.17■□□□□ 0.18
LINC00404-201ENST00000418660 SNAP47Q5SQN1 464 aa16.17■□□□□ 0.18
LINC00404-201ENST00000418660 FNBP1LQ5T0N5 605 aa16.17■□□□□ 0.18
LINC00404-201ENST00000418660 ARHGAP40Q5TG30 622 aa16.17■□□□□ 0.18
LINC00404-201ENST00000418660 PLXDC1Q8IUK5 500 aa16.17■□□□□ 0.18
LINC00404-201ENST00000418660 ULK4Q96C45 1275 aa16.17■□□□□ 0.18
LINC00404-201ENST00000418660 CXorf40BQ96DE9 158 aa16.17■□□□□ 0.18
LINC00404-201ENST00000418660 SGF29Q96ES7 293 aa16.17■□□□□ 0.18
LINC00404-201ENST00000418660 BBC3Q96PG8 261 aaPredicted RBP16.17■□□□□ 0.18
LINC00404-201ENST00000418660 ALS2CR12Q96Q35 445 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms