RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 PERM1Q5SV97 790 aa18.36■□□□□ 0.53
PTCD3-204ENST00000418628 TMEM135Q86UB9 458 aa18.36■□□□□ 0.53
PTCD3-204ENST00000418628 TRAPPC5Q8IUR0 188 aa18.36■□□□□ 0.53
PTCD3-204ENST00000418628 SFRP1Q8N474 314 aa18.36■□□□□ 0.53
PTCD3-204ENST00000418628 PNPLA1Q8N8W4 532 aa18.36■□□□□ 0.53
PTCD3-204ENST00000418628 OR4L1Q8NH43 312 aa18.36■□□□□ 0.53
PTCD3-204ENST00000418628 IFI44Q8TCB0 444 aa18.36■□□□□ 0.53
PTCD3-204ENST00000418628 PATE1Q8WXA2 126 aa18.36■□□□□ 0.53
PTCD3-204ENST00000418628 SNF8Q96H20 258 aa18.36■□□□□ 0.53
PTCD3-204ENST00000418628 DPEP2Q9H4A9 486 aa18.36■□□□□ 0.53
PTCD3-204ENST00000418628 SIRPGQ9P1W8 387 aa18.36■□□□□ 0.53
PTCD3-204ENST00000418628 TBC1D29Q9UFV1 150 aa18.36■□□□□ 0.53
PTCD3-204ENST00000418628 FAM221BA6H8Z2 402 aa18.35■□□□□ 0.53
PTCD3-204ENST00000418628 SDR42E2A6NKP2 422 aa18.35■□□□□ 0.53
PTCD3-204ENST00000418628 OR2AG2A6NM03 316 aa18.35■□□□□ 0.53
PTCD3-204ENST00000418628 NUDT21O43809 227 aaKnown RBP18.35■□□□□ 0.53
PTCD3-204ENST00000418628 F3P13726 295 aa18.35■□□□□ 0.53
PTCD3-204ENST00000418628 PNLIPP16233 465 aa18.35■□□□□ 0.53
PTCD3-204ENST00000418628 RPL21P46778 160 aaKnown RBP18.35■□□□□ 0.53
PTCD3-204ENST00000418628 FASLGP48023 281 aa18.35■□□□□ 0.53
PTCD3-204ENST00000418628 ARCN1P48444 511 aaKnown RBP18.35■□□□□ 0.53
PTCD3-204ENST00000418628 PRAMEP78395 509 aa18.35■□□□□ 0.53
PTCD3-204ENST00000418628 PLA2G4EQ3MJ16 856 aa18.35■□□□□ 0.53
PTCD3-204ENST00000418628 AGAP9Q5VTM2 703 aa18.35■□□□□ 0.53
PTCD3-204ENST00000418628 TMEM220Q6QAJ8 160 aa18.35■□□□□ 0.53
PTCD3-204ENST00000418628 WASH2PQ6VEQ5 465 aa18.35■□□□□ 0.53
PTCD3-204ENST00000418628 EFL1Q7Z2Z2 1120 aaKnown RBP18.35■□□□□ 0.53
PTCD3-204ENST00000418628 OR6C4Q8NGE1 309 aa18.35■□□□□ 0.53
PTCD3-204ENST00000418628 WDR83Q9BRX9 315 aaKnown RBP18.35■□□□□ 0.53
PTCD3-204ENST00000418628 TRIM56Q9BRZ2 755 aaKnown RBP18.35■□□□□ 0.53
PTCD3-204ENST00000418628 WASH6PQ9NQA3 447 aa18.35■□□□□ 0.53
PTCD3-204ENST00000418628 KLC4Q9NSK0 619 aa18.35■□□□□ 0.53
PTCD3-204ENST00000418628 RABGEF1Q9UJ41 708 aa18.35■□□□□ 0.53
PTCD3-204ENST00000418628 ANKRD12Q6UB98 2062 aa18.34■□□□□ 0.53
PTCD3-204ENST00000418628 ZCWPW2A0A1B0GU75 182 aa18.34■□□□□ 0.53
PTCD3-204ENST00000418628 KLHL33A6NCF5 533 aa18.34■□□□□ 0.53
PTCD3-204ENST00000418628 URI1O94763 535 aaPredicted RBP18.34■□□□□ 0.53
PTCD3-204ENST00000418628 ATP1B2P14415 290 aaPredicted RBP18.34■□□□□ 0.53
PTCD3-204ENST00000418628 GLB1P16278 677 aa18.34■□□□□ 0.53
PTCD3-204ENST00000418628 MAZP56270 477 aaKnown RBP18.34■□□□□ 0.53
PTCD3-204ENST00000418628 INSCQ1MX18 579 aa18.34■□□□□ 0.53
PTCD3-204ENST00000418628 MSS51Q4VC12 460 aa18.34■□□□□ 0.53
PTCD3-204ENST00000418628 FNBP1LQ5T0N5 605 aa18.34■□□□□ 0.53
PTCD3-204ENST00000418628 CDCP2Q5VXM1 449 aa18.34■□□□□ 0.53
PTCD3-204ENST00000418628 CERS6Q6ZMG9 384 aa18.34■□□□□ 0.53
PTCD3-204ENST00000418628 NAT14Q8WUY8 206 aa18.34■□□□□ 0.53
PTCD3-204ENST00000418628 SGF29Q96ES7 293 aa18.34■□□□□ 0.53
PTCD3-204ENST00000418628 TTC25Q96NG3 672 aa18.34■□□□□ 0.53
PTCD3-204ENST00000418628 FCRL3Q96P31 734 aaPredicted RBP18.34■□□□□ 0.53
PTCD3-204ENST00000418628 ERP44Q9BS26 406 aa18.34■□□□□ 0.53
PTCD3-204ENST00000418628 MARCH4Q9P2E8 410 aaPredicted RBP18.34■□□□□ 0.53
PTCD3-204ENST00000418628 ACACBO00763 2458 aa18.33■□□□□ 0.53
PTCD3-204ENST00000418628 MAGEB16A2A368 324 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 EFCAB8A8MWE9 144 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 CFAP99D6REC4 459 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 POP7O75817 140 aaKnown RBP18.33■□□□□ 0.52
PTCD3-204ENST00000418628 USP1O94782 785 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 AP2A2O94973 939 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 TOP3BO95985 862 aaKnown RBP18.33■□□□□ 0.52
PTCD3-204ENST00000418628 RALBP11234 206 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 BRAFP15056 766 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 NSG1P42857 185 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 ITGA8P53708 1063 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 MRPS25P82663 173 aaKnown RBP18.33■□□□□ 0.52
PTCD3-204ENST00000418628 INSM1Q01101 510 aaPredicted RBP18.33■□□□□ 0.52
PTCD3-204ENST00000418628 FOXK2Q01167 660 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 TUBB2AQ13885 445 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 TYSND1Q2T9J0 566 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 ANKRD20A4Q4UJ75 823 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.33■□□□□ 0.52
PTCD3-204ENST00000418628 LYPLAL1Q5VWZ2 237 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 DUPD1Q68J44 220 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 IYDQ6PHW0 289 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 CES3Q6UWW8 571 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 ABRAXAS1Q6UWZ7 409 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 DHRS13Q6UX07 377 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 FAM83HQ6ZRV2 1179 aaPredicted RBP18.33■□□□□ 0.52
PTCD3-204ENST00000418628 DET1Q7L5Y6 550 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 TMPRSS7Q7RTY8 843 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 MAATS1Q7Z4T9 603 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 AMZ2Q86W34 360 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 CACTIN-AS1Q8N1I8 211 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 ARL14Q8N4G2 192 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 BEND7Q8N7W2 519 aaPredicted RBP18.33■□□□□ 0.52
PTCD3-204ENST00000418628 GPR150Q8NGU9 434 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 OR2L2Q8NH16 312 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 SLC37A2Q8TED4 501 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.33■□□□□ 0.52
PTCD3-204ENST00000418628 CCDC74AQ96AQ1 378 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 TUBB2BQ9BVA1 445 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 PLAC1Q9HBJ0 212 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 CATSPERZQ9NTU4 200 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 GRHL1Q9NZI5 618 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 PRSS21Q9Y6M0 314 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 RNF215Q9Y6U7 377 aa18.33■□□□□ 0.52
PTCD3-204ENST00000418628 IGF2RP11717 2491 aa18.32■□□□□ 0.52
PTCD3-204ENST00000418628 MGAT4DA6NG13 374 aa18.32■□□□□ 0.52
PTCD3-204ENST00000418628 BHMG1C9JSJ3 638 aaPredicted RBP18.32■□□□□ 0.52
PTCD3-204ENST00000418628 E7ESA3 106 aa18.32■□□□□ 0.52
PTCD3-204ENST00000418628 NTN3O00634 580 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms