RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 INSCQ1MX18 579 aa20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 AMZ1Q400G9 498 aa20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 LSMEM2Q8N112 164 aa20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 OR13J1Q8NGT2 312 aa20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 TMEM74Q96NL1 305 aa20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 ASB8Q9H765 288 aa20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 CASS4Q9NQ75 786 aa20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 CPNE7Q9UBL6 633 aa20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 DNAJC16Q9Y2G8 782 aa20.27■□□□□ 0.84
PKNOX1-202ENST00000418336 PTPRQQ9UMZ3 2332 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 OR2AG2A6NM03 316 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 OR5K4A6NMS3 321 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 PLD2O14939 933 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 POP7O75817 140 aaKnown RBP20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 THRAP10827 490 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 ITPKBP27987 946 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 ACTN2P35609 894 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 ETV5P41161 510 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 KCNJ1P48048 391 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 LIMK2P53671 638 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 EIF3IQ13347 325 aaKnown RBP20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 CLCA4Q14CN2 919 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 BCL7AQ4VC05 210 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 TTC27Q6P3X3 843 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 TMEM220Q6QAJ8 160 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 RAB11FIP2Q7L804 512 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 SNX20Q7Z614 316 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 SLC9B2Q86UD5 537 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 TRAPPC5Q8IUR0 188 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 PIANPQ8IYJ0 282 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 NXPE1Q8N323 547 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 BEND7Q8N7W2 519 aaPredicted RBP20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 OR4D9Q8NGE8 314 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 GDAP1Q8TB36 358 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 SGF29Q96ES7 293 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 CRELD1Q96HD1 420 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 CDKN2AIPNLQ96HQ2 116 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 LINC00615Q96LM1 132 aaPredicted RBP20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 FAM96AQ9H5X1 160 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 UCK1Q9HA47 277 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 KCNK4Q9NYG8 393 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 JRKLQ9Y4A0 524 aa20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 DNMT3AQ9Y6K1 912 aaPredicted RBP20.26■□□□□ 0.83
PKNOX1-202ENST00000418336 LILRA5A6NI73 299 aa20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 TMX2-CTNND1H3BSU7 103 aa20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 CEP104O60308 925 aa20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 ITGA2BP08514 1039 aa20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 RPL10P27635 214 aaKnown RBP20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 MC4RP32245 332 aa20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 HADHAP40939 763 aa20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 MLLT3P42568 568 aaPredicted RBP20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 DRG2P55039 364 aaKnown RBP20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 GPLD1P80108 840 aa20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 COL28A1Q2UY09 1125 aa20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 C19orf48Q6RUI8 117 aa20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 PIM3Q86V86 326 aa20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 CCDC74BQ96LY2 380 aa20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 ZNF778Q96MU6 729 aa20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 OSGEPL1Q9H4B0 414 aa20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 RAB6BQ9NRW1 208 aa20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 PAK5Q9P286 719 aa20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 TTC7AQ9ULT0 858 aaPredicted RBP20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 LOXL2Q9Y4K0 774 aa20.25■□□□□ 0.83
PKNOX1-202ENST00000418336 OR52A4PA6NMU1 304 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 USP27XA6NNY8 438 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 KCNJ13O60928 360 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 TNFSF15O95150 251 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 SLC2A4P14672 509 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 ITIH1P19827 911 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 EPHA4P54764 986 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 ACVR1Q04771 509 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 CDH17Q12864 832 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 NFE2L1Q14494 772 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 SEPT7Q16181 437 aaKnown RBP20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 LONRF2Q1L5Z9 754 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 MAP9Q49MG5 647 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 CCDC38Q502W7 563 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 ZNF534Q76KX8 674 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 DET1Q7L5Y6 550 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 LINC00523Q86TU6 105 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 SLC35F6Q8N357 371 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 FBXO39Q8N4B4 442 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 RCBTB1Q8NDN9 531 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 STYXQ8WUJ0 223 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 HNRNPLLQ8WVV9 542 aaKnown RBP20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 MS4A14Q96JA4 679 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 RANBP9Q96S59 729 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 TBC1D10AQ9BXI6 508 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 ZCCHC2Q9C0B9 1178 aaKnown RBP20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 SLC40A1Q9NP59 571 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 EIF2B3Q9NR50 452 aaKnown RBP20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 SMARCAL1Q9NZC9 954 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 SLC2A6Q9UGQ3 507 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 RALYQ9UKM9 306 aaKnown RBP20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 ACSL6Q9UKU0 697 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 NEU2Q9Y3R4 380 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 PCDHGA7Q9Y5G6 932 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 SLC30A1Q9Y6M5 507 aa20.24■□□□□ 0.83
PKNOX1-202ENST00000418336 OR51F1A6NGY5 319 aa20.23■□□□□ 0.83
PKNOX1-202ENST00000418336 NRDCO43847 1150 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms