RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 LRRC15Q8TF66 581 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 AENQ8WTP8 325 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 C2orf15Q8WU43 125 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 CPA5Q8WXQ8 436 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 CAVIN3Q969G5 261 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 DHX58Q96C10 678 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 NSMCE3Q96MG7 304 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 CCT8L2Q96SF2 557 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 RIT2Q99578 217 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 SYT15Q9BQS2 421 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 SIKE1Q9BRV8 207 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 BTBD2Q9BX70 525 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 TEKT3Q9BXF9 490 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 FAM129AQ9BZQ8 928 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 PITHD1Q9GZP4 211 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 BTBD1Q9H0C5 482 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 SERHL2Q9H4I8 314 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 MTG2Q9H4K7 406 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 ZNF552Q9H707 407 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 RIC8AQ9NPQ8 531 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 DNAJC17Q9NVM6 304 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 RHBDL2Q9NX52 303 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 TBC1D14Q9P2M4 693 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 PISDQ9UG56 409 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 AGAP1Q9UPQ3 857 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 CFL2Q9Y281 166 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 PPP2R2CQ9Y2T4 447 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 A0A0A6YYJ9 748 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 LY6G6EA0A0G2JKS1 128 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 PRAMEF33A0A0G2JMD5 474 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 PVALEFA0A1B0GWK0 134 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 A0A1W2PR77 199 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 SYCE1LA8MT33 242 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 CENPBD1B2RD01 187 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 AKR1B15C9JRZ8 316 aaPredicted RBP5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 H0Y3Z8 333 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 MKRN2OSH3BPM6 223 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 K7EM74 188 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 HRKO00198 91 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 TLR4O00206 839 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 IKBKBO14920 756 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 AREL1O15033 823 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 MCF2LO15068 1137 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 TRIM24O15164 1050 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 PRAMEF10O60809 474 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 IL18BPO95998 194 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 IGHV4-34P06331 123 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 GNAZP19086 355 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 KLK2P20151 261 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 CD82P27701 267 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 SSTR2P30874 369 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 MDH1P40925 334 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 MC3RP41968 323 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 PTDSS1P48651 473 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 PDX1P52945 283 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 COPAP53621 1224 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 GP2P55259 537 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 ADARP55265 1226 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 PSMC5P62195 406 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 KRT83P78385 493 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 S100A12P80511 92 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 ZXDBP98169 803 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 CDC20Q12834 499 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 FGL2Q14314 439 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 STILQ15468 1287 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 P3H1Q32P28 736 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 CEP78Q5JTW2 689 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 PHF19Q5T6S3 580 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 VASNQ6EMK4 673 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 HIBCHQ6NVY1 386 aaPredicted RBP5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 DUS1LQ6P1R4 473 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 TMEM154Q6P9G4 183 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 INTS8Q75QN2 995 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 RAB11FIP2Q7L804 512 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 ZNF572Q7Z3I7 529 aaPredicted RBP5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 TMPRSS9Q7Z410 1059 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 PATL1Q86TB9 770 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 MAP7D3Q8IWC1 876 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 CCDC83Q8IWF9 413 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 CADM3Q8N126 398 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 MIER2Q8N344 545 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 SRBD1Q8N5C6 995 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 BBOF1Q8ND07 529 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 CHDHQ8NE62 594 aaPredicted RBP5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 OR7G1Q8NGA0 311 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 SPPL2BQ8TCT7 592 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 OTUD7AQ8TE49 926 aaPredicted RBP5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 CRYGNQ8WXF5 182 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 NDRG1Q92597 394 aaKnown RBP5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 APOLD1Q96LR9 279 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 MOGAT1Q96PD6 335 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 GBP5Q96PP8 586 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 SLITRK1Q96PX8 696 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 PANX2Q96RD6 677 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 TRIM9Q9C026 710 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 LHX5Q9H2C1 402 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 ZHX3Q9H4I2 956 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 RNPEPL1Q9HAU8 725 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 EPB41L5Q9HCM4 733 aa5.5□□□□□ -1.53
ECHDC1-206ENST00000417628 PALMDQ9NP74 551 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms