RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 DPM1O60762 260 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 CPNE3O75131 537 aaKnown RBP9.84□□□□□ -0.83
MDC1-202ENST00000416571 MTX2O75431 263 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 SORBS2O94875 1100 aaKnown RBP9.84□□□□□ -0.83
MDC1-202ENST00000416571 CDK14O94921 469 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 CD48P09326 243 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 IL4RP24394 825 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 VARSP26640 1264 aaKnown RBP9.84□□□□□ -0.83
MDC1-202ENST00000416571 PRKCIP41743 596 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 DCDC1P59894 354 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 IHHQ14623 411 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 ESPL1Q14674 2120 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 PLCL1Q15111 1095 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 EIF2S3LQ2VIR3 472 aaKnown RBP9.84□□□□□ -0.83
MDC1-202ENST00000416571 FILIP1LQ4L180 1135 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 ZFYVE27Q5T4F4 411 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 CCDC183Q5T5S1 534 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 CCDC70Q6NSX1 233 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 PWWP2BQ6NUJ5 590 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 FAM199XQ6PEV8 388 aaPredicted RBP9.84□□□□□ -0.83
MDC1-202ENST00000416571 TRAPPC5Q8IUR0 188 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 TMEM126BQ8IUX1 230 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 TTC30BQ8N4P2 665 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 KCTD6Q8NC69 237 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 GDAP1Q8TB36 358 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 PRR7Q8TB68 274 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 MR1Q95460 341 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 FATE1Q969F0 183 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 TSGA13Q96PP4 275 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 RUFY1Q96T51 708 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 ISCUQ9H1K1 167 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 FGF21Q9NSA1 209 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 PCDHGB7Q9Y5F8 929 aa9.84□□□□□ -0.83
MDC1-202ENST00000416571 SPENQ96T58 3664 aaKnown RBP9.84□□□□□ -0.83
MDC1-202ENST00000416571 SETD2Q9BYW2 2564 aaPredicted RBP9.84□□□□□ -0.83
MDC1-202ENST00000416571 ITPR2Q14571 2701 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 IGHV5-51A0A0C4DH38 117 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 UBA6A0AVT1 1052 aaPredicted RBP9.83□□□□□ -0.84
MDC1-202ENST00000416571 MYO1FO00160 1098 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 KCNK1O00180 336 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 SCRG1O75711 98 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 JCHAINP01591 159 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 KLK3P07288 261 aaPredicted RBP9.83□□□□□ -0.84
MDC1-202ENST00000416571 PIRTP0C851 137 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 EBLN1P0CF75 366 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 SKILP12757 684 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 BRAFP15056 766 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 FOLR1P15328 257 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 FECHP22830 423 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 PTGIRP43119 386 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 DPYSL3Q14195 570 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 KCNAB1Q14722 419 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 INPP5JQ15735 1006 aaPredicted RBP9.83□□□□□ -0.84
MDC1-202ENST00000416571 DNTTIP2Q5QJE6 756 aaKnown RBP9.83□□□□□ -0.84
MDC1-202ENST00000416571 TMTC4Q5T4D3 741 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 AGAP9Q5VTM2 703 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 WASH2PQ6VEQ5 465 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 APTXQ7Z2E3 356 aaKnown RBP9.83□□□□□ -0.84
MDC1-202ENST00000416571 KMT5CQ86Y97 462 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 HPS6Q86YV9 775 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 MAP7D3Q8IWC1 876 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 RHOT1Q8IXI2 618 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 FAM71BQ8TC56 605 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 HDAC11Q96DB2 347 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 SLC41A2Q96JW4 573 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 ZNF514Q96K75 400 aaPredicted RBP9.83□□□□□ -0.84
MDC1-202ENST00000416571 BTBD6Q96KE9 485 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 ZNF670Q9BS34 389 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 WASH6PQ9NQA3 447 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 DTLQ9NZJ0 730 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 LUZP4Q9P127 313 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 NFKBIL1Q9UBC1 381 aaPredicted RBP9.83□□□□□ -0.84
MDC1-202ENST00000416571 SNX7Q9UNH6 387 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 FARSAQ9Y285 508 aaKnown RBP9.83□□□□□ -0.84
MDC1-202ENST00000416571 ZNF711Q9Y462 761 aa9.83□□□□□ -0.84
MDC1-202ENST00000416571 SHANK1Q9Y566 2161 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 TLCD2A6NGC4 264 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 TCP11X1B4DZS4 312 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 KCNJ13O60928 360 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 TMEM63AO94886 807 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 POU3F2P20265 443 aaPredicted RBP9.82□□□□□ -0.84
MDC1-202ENST00000416571 PPP1CAP62136 330 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 HSD11B2P80365 405 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 GBE1Q04446 702 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 IL10RAQ13651 578 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 PDK2Q15119 407 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 PCSK7Q16549 785 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 PRR30Q53SZ7 412 aaPredicted RBP9.82□□□□□ -0.84
MDC1-202ENST00000416571 PAPD7Q5XG87 772 aaKnown RBP9.82□□□□□ -0.84
MDC1-202ENST00000416571 E4F1Q66K89 784 aaPredicted RBP9.82□□□□□ -0.84
MDC1-202ENST00000416571 ARMC6Q6NXE6 501 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 JMJD6Q6NYC1 403 aaPredicted RBP9.82□□□□□ -0.84
MDC1-202ENST00000416571 RBM43Q6ZSC3 357 aaKnown RBP9.82□□□□□ -0.84
MDC1-202ENST00000416571 MAMDC2Q7Z304 686 aaPredicted RBP9.82□□□□□ -0.84
MDC1-202ENST00000416571 ZNF547Q8IVP9 402 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 LRRN4Q8WUT4 740 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 EID2BQ96D98 161 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 SRPK1Q96SB4 655 aaKnown RBP9.82□□□□□ -0.84
MDC1-202ENST00000416571 CD180Q99467 661 aa9.82□□□□□ -0.84
MDC1-202ENST00000416571 MAP3K3Q99759 626 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms