RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 THRAP10827 490 aa25.88■■□□□ 1.73
VEGFA-207ENST00000413642 ZNF140P52738 457 aaPredicted RBP25.88■■□□□ 1.73
VEGFA-207ENST00000413642 GPLD1P80108 840 aa25.88■■□□□ 1.73
VEGFA-207ENST00000413642 SNX1Q13596 522 aa25.88■■□□□ 1.73
VEGFA-207ENST00000413642 RPS6KA1Q15418 735 aa25.88■■□□□ 1.73
VEGFA-207ENST00000413642 SNAP47Q5SQN1 464 aa25.88■■□□□ 1.73
VEGFA-207ENST00000413642 TMEM71Q6P5X7 295 aa25.88■■□□□ 1.73
VEGFA-207ENST00000413642 FAM83HQ6ZRV2 1179 aaPredicted RBP25.88■■□□□ 1.73
VEGFA-207ENST00000413642 DET1Q7L5Y6 550 aa25.88■■□□□ 1.73
VEGFA-207ENST00000413642 BEND7Q8N7W2 519 aaPredicted RBP25.88■■□□□ 1.73
VEGFA-207ENST00000413642 TMEM159Q96B96 161 aa25.88■■□□□ 1.73
VEGFA-207ENST00000413642 FCRL3Q96P31 734 aaPredicted RBP25.88■■□□□ 1.73
VEGFA-207ENST00000413642 PPP1R2P1Q96PQ5 205 aa25.88■■□□□ 1.73
VEGFA-207ENST00000413642 STN1Q9H668 368 aaKnown RBP25.88■■□□□ 1.73
VEGFA-207ENST00000413642 ASB8Q9H765 288 aa25.88■■□□□ 1.73
VEGFA-207ENST00000413642 SMOXQ9NWM0 555 aa25.88■■□□□ 1.73
VEGFA-207ENST00000413642 FOXJ2Q9P0K8 574 aa25.88■■□□□ 1.73
VEGFA-207ENST00000413642 WDR37Q9Y2I8 494 aa25.88■■□□□ 1.73
VEGFA-207ENST00000413642 UNC13CQ8NB66 2214 aa25.87■■□□□ 1.73
VEGFA-207ENST00000413642 OR52A4PA6NMU1 304 aa25.87■■□□□ 1.73
VEGFA-207ENST00000413642 A8MU76 341 aa25.87■■□□□ 1.73
VEGFA-207ENST00000413642 LDB2O43679 373 aa25.87■■□□□ 1.73
VEGFA-207ENST00000413642 ZNF189O75820 626 aaPredicted RBP25.87■■□□□ 1.73
VEGFA-207ENST00000413642 CRTAMO95727 393 aa25.87■■□□□ 1.73
VEGFA-207ENST00000413642 XRCC1P18887 633 aaPredicted RBP25.87■■□□□ 1.73
VEGFA-207ENST00000413642 IDSP22304 550 aa25.87■■□□□ 1.73
VEGFA-207ENST00000413642 CXADRP78310 365 aa25.87■■□□□ 1.73
VEGFA-207ENST00000413642 CLN3Q13286 438 aa25.87■■□□□ 1.73
VEGFA-207ENST00000413642 TGIF1Q15583 401 aa25.87■■□□□ 1.73
VEGFA-207ENST00000413642 OASLQ15646 514 aaKnown RBP25.87■■□□□ 1.73
VEGFA-207ENST00000413642 ABRAXAS1Q6UWZ7 409 aa25.87■■□□□ 1.73
VEGFA-207ENST00000413642 NCSTNQ92542 709 aa25.87■■□□□ 1.73
VEGFA-207ENST00000413642 PMEPA1Q969W9 287 aa25.87■■□□□ 1.73
VEGFA-207ENST00000413642 SH3KBP1Q96B97 665 aa25.87■■□□□ 1.73
VEGFA-207ENST00000413642 SGF29Q96ES7 293 aa25.87■■□□□ 1.73
VEGFA-207ENST00000413642 ITPR1Q14643 2758 aa25.86■■□□□ 1.73
VEGFA-207ENST00000413642 C9orf172C9J069 976 aa25.86■■□□□ 1.73
VEGFA-207ENST00000413642 DUX1O43812 170 aa25.86■■□□□ 1.73
VEGFA-207ENST00000413642 FGF3P11487 239 aaPredicted RBP25.86■■□□□ 1.73
VEGFA-207ENST00000413642 ETS1P14921 441 aa25.86■■□□□ 1.73
VEGFA-207ENST00000413642 PBLDP30039 288 aaPredicted RBP25.86■■□□□ 1.73
VEGFA-207ENST00000413642 AKT1P31749 480 aa25.86■■□□□ 1.73
VEGFA-207ENST00000413642 CLCA4Q14CN2 919 aa25.86■■□□□ 1.73
VEGFA-207ENST00000413642 FNBP1LQ5T0N5 605 aa25.86■■□□□ 1.73
VEGFA-207ENST00000413642 RTP4Q96DX8 246 aa25.86■■□□□ 1.73
VEGFA-207ENST00000413642 DNAJC1Q96KC8 554 aaKnown RBP25.86■■□□□ 1.73
VEGFA-207ENST00000413642 BBC3Q96PG8 261 aaPredicted RBP25.86■■□□□ 1.73
VEGFA-207ENST00000413642 DPH1Q9BZG8 443 aa25.86■■□□□ 1.73
VEGFA-207ENST00000413642 LRRC40Q9H9A6 602 aa25.86■■□□□ 1.73
VEGFA-207ENST00000413642 WDR70Q9NW82 654 aa25.86■■□□□ 1.73
VEGFA-207ENST00000413642 SLC30A1Q9Y6M5 507 aa25.86■■□□□ 1.73
VEGFA-207ENST00000413642 LAMA5O15230 3695 aa25.86■■□□□ 1.73
VEGFA-207ENST00000413642 HGSO14964 777 aaPredicted RBP25.85■■□□□ 1.73
VEGFA-207ENST00000413642 NVLO15381 856 aaKnown RBP25.85■■□□□ 1.73
VEGFA-207ENST00000413642 VIPP01282 170 aa25.85■■□□□ 1.73
VEGFA-207ENST00000413642 MSH3P20585 1137 aa25.85■■□□□ 1.73
VEGFA-207ENST00000413642 NFE2L1Q14494 772 aa25.85■■□□□ 1.73
VEGFA-207ENST00000413642 SOWAHCQ53LP3 525 aaPredicted RBP25.85■■□□□ 1.73
VEGFA-207ENST00000413642 AMZ2Q86W34 360 aa25.85■■□□□ 1.73
VEGFA-207ENST00000413642 ZFAND4Q86XD8 727 aa25.85■■□□□ 1.73
VEGFA-207ENST00000413642 ZCCHC2Q9C0B9 1178 aaKnown RBP25.85■■□□□ 1.73
VEGFA-207ENST00000413642 OCIAD1Q9NX40 245 aa25.85■■□□□ 1.73
VEGFA-207ENST00000413642 OGFRQ9NZT2 677 aa25.85■■□□□ 1.73
VEGFA-207ENST00000413642 AKAP7Q9P0M2 348 aaPredicted RBP25.85■■□□□ 1.73
VEGFA-207ENST00000413642 PDP2Q9P2J9 529 aa25.85■■□□□ 1.73
VEGFA-207ENST00000413642 KLHL3Q9UH77 587 aa25.85■■□□□ 1.73
VEGFA-207ENST00000413642 PSMD13Q9UNM6 376 aa25.85■■□□□ 1.73
VEGFA-207ENST00000413642 CCDC78A2IDD5 438 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 AP2A1O95782 977 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 IFNB1P01574 187 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 PRSS56P0CW18 603 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 CDKN1CP49918 316 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-207ENST00000413642 TRA2AQ13595 282 aaKnown RBP eCLIP25.84■■□□□ 1.731e-8■■□□□ 12.8
VEGFA-207ENST00000413642 POU6F1Q14863 301 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 SIX1Q15475 284 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-207ENST00000413642 P3H1Q32P28 736 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 AGAP9Q5VTM2 703 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 BROXQ5VW32 411 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 WASH2PQ6VEQ5 465 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 ZNF662Q6ZS27 426 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 TMEM26Q6ZUK4 368 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 TRIM48Q8IWZ4 208 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 GLIS1Q8NBF1 620 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 DPYSL5Q9BPU6 564 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 LDHAL6BQ9BYZ2 381 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-207ENST00000413642 ETNK1Q9HBU6 452 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 WASH6PQ9NQA3 447 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 FEZ2Q9UHY8 353 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-207ENST00000413642 ZNF148Q9UQR1 794 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 SSUH2Q9Y2M2 353 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 FAM208BQ5VWN6 2430 aa25.84■■□□□ 1.73
VEGFA-207ENST00000413642 SGTAO43765 313 aa25.83■■□□□ 1.73
VEGFA-207ENST00000413642 TYRP1P17643 537 aa25.83■■□□□ 1.73
VEGFA-207ENST00000413642 VCLP18206 1134 aa25.83■■□□□ 1.73
VEGFA-207ENST00000413642 STIP1P31948 543 aaKnown RBP25.83■■□□□ 1.73
VEGFA-207ENST00000413642 EPHA4P54764 986 aa25.83■■□□□ 1.73
VEGFA-207ENST00000413642 SRSF6Q13247 344 aaKnown RBP25.83■■□□□ 1.73
VEGFA-207ENST00000413642 SEPT6Q14141 434 aa25.83■■□□□ 1.73
VEGFA-207ENST00000413642 WDR74Q6RFH5 385 aaPredicted RBP25.83■■□□□ 1.73
VEGFA-207ENST00000413642 AGBL5Q8NDL9 886 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms