RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 CATSPER1Q8NEC5 780 aa12.9□□□□□ -0.35
LITAF-203ENST00000413364 LILRB1Q8NHL6 650 aaPredicted RBP12.9□□□□□ -0.35
LITAF-203ENST00000413364 TRIM43Q96BQ3 446 aaPredicted RBP12.9□□□□□ -0.35
LITAF-203ENST00000413364 CMTM5Q96DZ9 223 aa12.9□□□□□ -0.35
LITAF-203ENST00000413364 LRGUKQ96M69 825 aa12.9□□□□□ -0.35
LITAF-203ENST00000413364 FEM1AQ9BSK4 669 aa12.9□□□□□ -0.35
LITAF-203ENST00000413364 ADGRE3Q9BY15 652 aa12.9□□□□□ -0.35
LITAF-203ENST00000413364 POPDC3Q9HBV1 291 aa12.9□□□□□ -0.35
LITAF-203ENST00000413364 INTS10Q9NVR2 710 aaKnown RBP12.9□□□□□ -0.35
LITAF-203ENST00000413364 HACD3Q9P035 362 aa12.9□□□□□ -0.35
LITAF-203ENST00000413364 LHX3Q9UBR4 397 aa12.9□□□□□ -0.35
LITAF-203ENST00000413364 STK39Q9UEW8 545 aa12.9□□□□□ -0.35
LITAF-203ENST00000413364 DTNAQ9Y4J8 743 aa12.9□□□□□ -0.35
LITAF-203ENST00000413364 PCDHGC4Q9Y5F7 938 aa12.9□□□□□ -0.35
LITAF-203ENST00000413364 TYW5A2RUC4 315 aaKnown RBP12.89□□□□□ -0.35
LITAF-203ENST00000413364 KRBA1A5PL33 1030 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 C2orf81A6NN90 581 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 SCAMP3O14828 347 aaKnown RBP12.89□□□□□ -0.35
LITAF-203ENST00000413364 DCXO43602 365 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 ZBTB14O43829 449 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 IPO13O94829 963 aaKnown RBP12.89□□□□□ -0.35
LITAF-203ENST00000413364 SLC4A1P02730 911 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 KCNA5P22460 613 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 PEX2P28328 305 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 ALDH3B2P48448 385 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 ZXDBP98169 803 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 TIAL1Q01085 375 aaKnown RBP eCLIP12.89□□□□□ -0.355e-7■□□□□ 11.1
LITAF-203ENST00000413364 GPR158Q5T848 1215 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 NCEH1Q6PIU2 408 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 SLC22A9Q8IVM8 553 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 SPARTQ8N0X7 666 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 PHTF2Q8N3S3 785 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 KDM1BQ8NB78 822 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 MDGA1Q8NFP4 955 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 OR4K2Q8NGD2 314 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 TRUB1Q8WWH5 349 aaKnown RBP12.89□□□□□ -0.35
LITAF-203ENST00000413364 SDCCAG3Q96C92 435 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 DHRS9Q9BPW9 319 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 AARSD1Q9BTE6 412 aaKnown RBP12.89□□□□□ -0.35
LITAF-203ENST00000413364 ZBP1Q9H171 429 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 C11orf49Q9H6J7 331 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 IL20Q9NYY1 176 aa12.89□□□□□ -0.35
LITAF-203ENST00000413364 FAM25EA8MYX2 175 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 KIAA0355O15063 1070 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 ICMTO60725 284 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 DNAJA2O60884 412 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 TMCC2O75069 709 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 C8BP07358 591 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 CTRB1P17538 263 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 IST1P53990 364 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 MYBPC1Q00872 1141 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 TRAF2Q12933 501 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 KLF10Q13118 480 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 CTRB2Q6GPI1 263 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 TMEM126BQ8IUX1 230 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 POU5F2Q8N7G0 328 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 TNIP2Q8NFZ5 429 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 SH3RF2Q8TEC5 729 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 ALG14Q96F25 216 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 KLHL25Q9H0H3 589 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 WDR55Q9H6Y2 383 aaPredicted RBP12.88□□□□□ -0.35
LITAF-203ENST00000413364 VPS51Q9UID3 782 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 VPS28Q9UK41 221 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 GOLGA8QA0A0J9YX86 632 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 GOLGA8OA6NCC3 632 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 ANKRD66B4E2M5 251 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 GOLGA8NF8WBI6 632 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 FGF18O76093 207 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 CNPP09543 421 aaKnown RBP12.88□□□□□ -0.35
LITAF-203ENST00000413364 ACRP10323 421 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 CTSAP10619 480 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 LPOP22079 712 aaPredicted RBP12.88□□□□□ -0.35
LITAF-203ENST00000413364 GABRR2P28476 465 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 CSKP41240 450 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 CDH18Q13634 790 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 LSM12Q3MHD2 195 aaKnown RBP12.88□□□□□ -0.35
LITAF-203ENST00000413364 OGFRL1Q5TC84 451 aaPredicted RBP12.88□□□□□ -0.35
LITAF-203ENST00000413364 GAREM2Q75VX8 874 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 ISCA2Q86U28 154 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 DCAF4L2Q8NA75 395 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 HPS1Q92902 700 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 PAWRQ96IZ0 340 aaKnown RBP12.88□□□□□ -0.35
LITAF-203ENST00000413364 ZNF641Q96N77 438 aaPredicted RBP12.88□□□□□ -0.35
LITAF-203ENST00000413364 SMIM14Q96QK8 99 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 ALG9Q9H6U8 611 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 CYP4F12Q9HCS2 524 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 DNMT3BQ9UBC3 853 aaKnown RBP12.88□□□□□ -0.35
LITAF-203ENST00000413364 MOSPD1Q9UJG1 213 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 LSM7Q9UK45 103 aaKnown RBP12.88□□□□□ -0.35
LITAF-203ENST00000413364 ADAMTS6Q9UKP5 1117 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 CDYLQ9Y232 598 aa12.88□□□□□ -0.35
LITAF-203ENST00000413364 MTF2Q9Y483 593 aaPredicted RBP12.88□□□□□ -0.35
LITAF-203ENST00000413364 MEI4A8MW99 385 aa12.87□□□□□ -0.35
LITAF-203ENST00000413364 CFAP99D6REC4 459 aa12.87□□□□□ -0.35
LITAF-203ENST00000413364 NEMP1O14524 444 aa12.87□□□□□ -0.35
LITAF-203ENST00000413364 TGM5O43548 720 aa12.87□□□□□ -0.35
LITAF-203ENST00000413364 INHBBP09529 407 aa12.87□□□□□ -0.35
LITAF-203ENST00000413364 PRSS56P0CW18 603 aa12.87□□□□□ -0.35
LITAF-203ENST00000413364 EPHA3P29320 983 aa12.87□□□□□ -0.35
LITAF-203ENST00000413364 RHOAP61586 193 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms