RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 IFI30P13284 250 aa13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 PRKACGP22612 351 aa13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 AP5B1Q2VPB7 878 aa13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 DSG4Q86SJ6 1040 aa13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 ITIH5Q86UX2 942 aa13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 CPNE9Q8IYJ1 553 aa13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 B3GALNT2Q8NCR0 500 aa13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 TRIM45Q9H8W5 580 aaPredicted RBP13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 STOML2Q9UJZ1 356 aa13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 RIPK3Q9Y572 518 aa13.77□□□□□ -0.21
CLTCL1-201ENST00000412649 HIST1H2AGP0C0S8 130 aaPredicted RBP13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 HIST1H2ADP20671 130 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 PRIM2P49643 509 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 ERVK-8P63133 956 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 CSNK2BP67870 215 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 NECAB2Q7Z6G3 386 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 TFAP2DQ7Z6R9 452 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 TICAM1Q8IUC6 712 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 ZDHHC21Q8IVQ6 265 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 NDNFQ8TB73 568 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 CNIH3Q8TBE1 160 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 HIST1H2AHQ96KK5 128 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 HIST1H2AJQ99878 128 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 H2AFJQ9BTM1 129 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 NUSAP1Q9BXS6 441 aaKnown RBP13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 RNF19AQ9NV58 838 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 PAQR5Q9NXK6 330 aaPredicted RBP13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 ERVK-18Q9QC07 812 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 KLQ9UEF7 1012 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 ADAM30Q9UKF2 790 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 PRR23D1E9PI22 279 aaPredicted RBP13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 FGF10O15520 208 aaPredicted RBP13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 UPK1BO75841 260 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 SERPINA1P01009 418 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 PRR23D2P0DMB1 279 aaPredicted RBP13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 RCVRNP35243 200 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 MAGEA3P43357 314 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 CDC42P60953 191 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 CDC42EP1Q00587 391 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 DCBLD1Q8N8Z6 715 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 CENPIQ92674 756 aaPredicted RBP13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 CDK5RAP1Q96SZ6 601 aaKnown RBP13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 KIFC1Q9BW19 673 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 HAPLN2Q9GZV7 340 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 ELOVL6Q9H5J4 265 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 NANOGQ9H9S0 305 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 DLEC1Q9Y238 1755 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 RRM2P31350 389 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 RAB25P57735 213 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 TBRG1Q3YBR2 411 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 DGKKQ5KSL6 1271 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 TMEM192Q8IY95 271 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 OR8H1Q8NGG4 311 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 GPBP1L1Q9HC44 474 aaPredicted RBP13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 CMTM6Q9NX76 183 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 MAPRE3Q9UPY8 281 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 CFL2Q9Y281 166 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 CORINQ9Y5Q5 1042 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 OR6C70A6NIJ9 312 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 MYL12BO14950 172 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 C4BPBP20851 252 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 IL4RP24394 825 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 HTR1EP28566 365 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 ITGA1P56199 1179 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 UFM1P61960 85 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 TP53BP2Q13625 1128 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 TTC23LQ6PF05 361 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 ZNF621Q6ZSS3 439 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 CYP4V2Q6ZWL3 525 aaPredicted RBP13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 CEP97Q8IW35 865 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 TSPEARQ8WU66 669 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 TMEM209Q96SK2 561 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 PRRG3Q9BZD7 231 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 SIX4Q9UIU6 781 aa13.76□□□□□ -0.21
CLTCL1-201ENST00000412649 ZCWPW2A0A1B0GU75 182 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 SNTNA6NMZ2 147 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 TMX2-CTNND1H3BSU7 103 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 MSI1O43347 362 aaKnown RBP13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 CRYZL1O95825 349 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 SLC6A2P23975 617 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 CYP2C18P33260 490 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 CD83Q01151 205 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 PAFAH1B3Q15102 231 aaKnown RBP13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 HIST2H2ACQ16777 129 aaPredicted RBP13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 CYBRD1Q53TN4 286 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 LRRC52Q8N7C0 313 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 TEX12Q9BXU0 123 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 DUSP16Q9BY84 665 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 CACYBPQ9HB71 228 aaKnown RBP13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 ING4Q9UNL4 249 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 KCNH4Q9UQ05 1017 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 RNF6Q9Y252 685 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 FAM155AB1AL88 458 aaPredicted RBP13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 FFAR3O14843 346 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 GPR42O15529 346 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 TSPAN3O60637 253 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 EPN2O95208 641 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 PGK1P00558 417 aa13.75□□□□□ -0.21
CLTCL1-201ENST00000412649 AKAP5P24588 427 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms