RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 FAM83HQ6ZRV2 1179 aaPredicted RBP12.96□□□□□ -0.33
HDAC8-210ENST00000412342 HOOK3Q86VS8 718 aa12.96□□□□□ -0.33
HDAC8-210ENST00000412342 SFRP1Q8N474 314 aa12.96□□□□□ -0.33
HDAC8-210ENST00000412342 BEND7Q8N7W2 519 aaPredicted RBP12.96□□□□□ -0.33
HDAC8-210ENST00000412342 SLC37A2Q8TED4 501 aa12.96□□□□□ -0.33
HDAC8-210ENST00000412342 CCDC74AQ96AQ1 378 aa12.96□□□□□ -0.33
HDAC8-210ENST00000412342 MFSD3Q96ES6 412 aa12.96□□□□□ -0.33
HDAC8-210ENST00000412342 SGF29Q96ES7 293 aa12.96□□□□□ -0.33
HDAC8-210ENST00000412342 ZNF514Q96K75 400 aaPredicted RBP12.96□□□□□ -0.33
HDAC8-210ENST00000412342 SIGLEC10Q96LC7 697 aa12.96□□□□□ -0.33
HDAC8-210ENST00000412342 LINC00615Q96LM1 132 aaPredicted RBP12.96□□□□□ -0.33
HDAC8-210ENST00000412342 COPS8Q99627 209 aa12.96□□□□□ -0.33
HDAC8-210ENST00000412342 CCDC3Q9BQI4 270 aa12.96□□□□□ -0.33
HDAC8-210ENST00000412342 TRIM56Q9BRZ2 755 aaKnown RBP12.96□□□□□ -0.33
HDAC8-210ENST00000412342 SCNM1Q9BWG6 230 aa12.96□□□□□ -0.33
HDAC8-210ENST00000412342 EVA1BQ9NVM1 165 aa12.96□□□□□ -0.33
HDAC8-210ENST00000412342 CDC23Q9UJX2 597 aa12.96□□□□□ -0.33
HDAC8-210ENST00000412342 DNMT3AQ9Y6K1 912 aaPredicted RBP12.96□□□□□ -0.33
HDAC8-210ENST00000412342 RNF215Q9Y6U7 377 aa12.96□□□□□ -0.33
HDAC8-210ENST00000412342 CEP295Q9C0D2 2601 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 PPM1DO15297 605 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 NUDT21O43809 227 aaKnown RBP12.95□□□□□ -0.34
HDAC8-210ENST00000412342 POP7O75817 140 aaKnown RBP12.95□□□□□ -0.34
HDAC8-210ENST00000412342 SEC31AO94979 1220 aaKnown RBP12.95□□□□□ -0.34
HDAC8-210ENST00000412342 F3P13726 295 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 BRAFP15056 766 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 PNLIPP16233 465 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 FASLGP48023 281 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 ARCN1P48444 511 aaKnown RBP12.95□□□□□ -0.34
HDAC8-210ENST00000412342 MRPS25P82663 173 aaKnown RBP12.95□□□□□ -0.34
HDAC8-210ENST00000412342 E2F1Q01094 437 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 ITIH4Q14624 930 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 FNBP1LQ5T0N5 605 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.95□□□□□ -0.34
HDAC8-210ENST00000412342 HES3Q5TGS1 186 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 IYDQ6PHW0 289 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 CES3Q6UWW8 571 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 PACS1Q6VY07 963 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 DET1Q7L5Y6 550 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 TMEM135Q86UB9 458 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 MARCH9Q86YJ5 346 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 CACTIN-AS1Q8N1I8 211 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 OR6C4Q8NGE1 309 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 OR4L1Q8NH43 312 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 HEXDCQ8WVB3 486 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 TTC25Q96NG3 672 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 TMEM121BQ9BXQ6 578 aaPredicted RBP12.95□□□□□ -0.34
HDAC8-210ENST00000412342 PRDM8Q9NQV8 689 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 SCHIP1Q9P0W5 487 aaPredicted RBP12.95□□□□□ -0.34
HDAC8-210ENST00000412342 MARCH4Q9P2E8 410 aaPredicted RBP12.95□□□□□ -0.34
HDAC8-210ENST00000412342 DNAJC16Q9Y2G8 782 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 NEUROG3Q9Y4Z2 214 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 PRSS21Q9Y6M0 314 aa12.95□□□□□ -0.34
HDAC8-210ENST00000412342 FAM237BA0A1B0GVD1 139 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 A0A1W2PQM1 296 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 SDR42E2A6NKP2 422 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 NTN3O00634 580 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-210ENST00000412342 RAD51CO43502 376 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 KCNJ13O60928 360 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 ATP1B2P14415 290 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-210ENST00000412342 PDX1P52945 283 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 UBE2IP63279 158 aaKnown RBP12.94□□□□□ -0.34
HDAC8-210ENST00000412342 MORF4L2Q15014 288 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 MSS51Q4VC12 460 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 AGAP9Q5VTM2 703 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 KIAA0930Q6ICG6 404 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-210ENST00000412342 HIBCHQ6NVY1 386 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-210ENST00000412342 ABRAXAS1Q6UWZ7 409 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 WASH2PQ6VEQ5 465 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 CCNI2Q6ZMN8 369 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-210ENST00000412342 TAS2R42Q7RTR8 314 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 PCGF5Q86SE9 256 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 AMZ2Q86W34 360 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 TMPRSS12Q86WS5 348 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 CLDN19Q8N6F1 224 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 DCBLD1Q8N8Z6 715 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 MAPK15Q8TD08 544 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 TRIM44Q96DX7 344 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-210ENST00000412342 DCUN1D1Q96GG9 259 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 FCRL3Q96P31 734 aaPredicted RBP12.94□□□□□ -0.34
HDAC8-210ENST00000412342 WDR83Q9BRX9 315 aaKnown RBP12.94□□□□□ -0.34
HDAC8-210ENST00000412342 WASH6PQ9NQA3 447 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 LRIT1Q9P2V4 623 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 ANGPTL2Q9UKU9 493 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 WDR37Q9Y2I8 494 aa12.94□□□□□ -0.34
HDAC8-210ENST00000412342 KIR2DS5A0A0G2JLQ3 304 aa12.93□□□□□ -0.34
HDAC8-210ENST00000412342 A0A0G2JNG1 304 aa12.93□□□□□ -0.34
HDAC8-210ENST00000412342 ZCWPW2A0A1B0GU75 182 aa12.93□□□□□ -0.34
HDAC8-210ENST00000412342 FAM149AA5PLN7 773 aa12.93□□□□□ -0.34
HDAC8-210ENST00000412342 MGAT4DA6NG13 374 aa12.93□□□□□ -0.34
HDAC8-210ENST00000412342 CFAP99D6REC4 459 aa12.93□□□□□ -0.34
HDAC8-210ENST00000412342 KIR2DS3K7RE56 304 aa12.93□□□□□ -0.34
HDAC8-210ENST00000412342 SNX2O60749 519 aa12.93□□□□□ -0.34
HDAC8-210ENST00000412342 TUBB4AP04350 444 aa12.93□□□□□ -0.34
HDAC8-210ENST00000412342 RALBP11234 206 aa12.93□□□□□ -0.34
HDAC8-210ENST00000412342 NSG1P42857 185 aa12.93□□□□□ -0.34
HDAC8-210ENST00000412342 RPL21P46778 160 aaKnown RBP12.93□□□□□ -0.34
HDAC8-210ENST00000412342 PRAMEP78395 509 aa12.93□□□□□ -0.34
HDAC8-210ENST00000412342 CAMK2BQ13554 666 aa12.93□□□□□ -0.34
HDAC8-210ENST00000412342 NFE2L1Q14494 772 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms