RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 LMLNQ96KR4 655 aa4.42□□□□□ -1.7
CLK1-203ENST00000409769 APOLD1Q96LR9 279 aa4.42□□□□□ -1.7
CLK1-203ENST00000409769 TEX13BQ9BXU2 312 aa4.42□□□□□ -1.7
CLK1-203ENST00000409769 FTOQ9C0B1 505 aaKnown RBP eCLIP4.42□□□□□ -1.7
CLK1-203ENST00000409769 INTS2Q9H0H0 1204 aaKnown RBP4.42□□□□□ -1.7
CLK1-203ENST00000409769 GLT8D2Q9H1C3 349 aa4.42□□□□□ -1.7
CLK1-203ENST00000409769 CDT1Q9H211 546 aa4.42□□□□□ -1.7
CLK1-203ENST00000409769 C6orf106Q9H6K1 298 aaPredicted RBP4.42□□□□□ -1.7
CLK1-203ENST00000409769 PSTPIP2Q9H939 334 aa4.42□□□□□ -1.7
CLK1-203ENST00000409769 RAVER2Q9HCJ3 691 aaKnown RBP4.42□□□□□ -1.7
CLK1-203ENST00000409769 ZCCHC17Q9NP64 241 aaKnown RBP4.42□□□□□ -1.7
CLK1-203ENST00000409769 MAP3K20Q9NYL2 800 aaKnown RBP4.42□□□□□ -1.7
CLK1-203ENST00000409769 CCPG1Q9ULG6 757 aa4.42□□□□□ -1.7
CLK1-203ENST00000409769 ISY1Q9ULR0 285 aaKnown RBP4.42□□□□□ -1.7
CLK1-203ENST00000409769 TBX20Q9UMR3 447 aa4.42□□□□□ -1.7
CLK1-203ENST00000409769 MRPL11Q9Y3B7 192 aaKnown RBP4.42□□□□□ -1.7
CLK1-203ENST00000409769 RIPK3Q9Y572 518 aa4.42□□□□□ -1.7
CLK1-203ENST00000409769 PTGDR2Q9Y5Y4 395 aa4.42□□□□□ -1.7
CLK1-203ENST00000409769 ELP1O95163 1332 aa4.42□□□□□ -1.7
CLK1-203ENST00000409769 TCF20Q9UGU0 1960 aaKnown RBP4.42□□□□□ -1.7
CLK1-203ENST00000409769 DOCK5Q9H7D0 1870 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 IGHV4-28A0A0C4DH34 117 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 A0A1B0GVC2 190 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 A0A1B0GVT2 93 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 PABPN1LA6NDY0 278 aaKnown RBP4.41□□□□□ -1.7
CLK1-203ENST00000409769 RRN3P2A6NIE6 340 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 PRSS47A8MTI9 375 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 PDHXO00330 501 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 ASAP2O43150 1006 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 LIASO43766 372 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 PAPSS2O95340 614 aaPredicted RBP4.41□□□□□ -1.7
CLK1-203ENST00000409769 YEATS4O95619 227 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 POLR2MP0CAP2 368 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 ZNF8P17098 575 aaPredicted RBP4.41□□□□□ -1.7
CLK1-203ENST00000409769 HOXA11P31270 313 aaPredicted RBP4.41□□□□□ -1.7
CLK1-203ENST00000409769 THPOP40225 353 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 MAPK9P45984 424 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 AMTP48728 403 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 MRPL12P52815 198 aaKnown RBP4.41□□□□□ -1.7
CLK1-203ENST00000409769 NUDT6P53370 316 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 TMPRSS3P57727 454 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 RPS6P62753 249 aaKnown RBP4.41□□□□□ -1.7
CLK1-203ENST00000409769 IRX3P78415 501 aaPredicted RBP4.41□□□□□ -1.7
CLK1-203ENST00000409769 CYP4A11Q02928 519 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 CRYZQ08257 329 aaKnown RBP4.41□□□□□ -1.7
CLK1-203ENST00000409769 ORC2Q13416 577 aaPredicted RBP4.41□□□□□ -1.7
CLK1-203ENST00000409769 HNF4GQ14541 408 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 SLC39A14Q15043 492 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 UBE2SQ16763 222 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 PRICKLE4Q2TBC4 344 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 EDRF1Q3B7T1 1238 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 TDRD12Q587J7 1177 aaKnown RBP4.41□□□□□ -1.7
CLK1-203ENST00000409769 JAKMIP3Q5VZ66 844 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 SNRNP48Q6IEG0 339 aaKnown RBP4.41□□□□□ -1.7
CLK1-203ENST00000409769 MOXD1Q6UVY6 613 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 NR2C2APQ86WQ0 139 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 C11orf65Q8NCR3 313 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 GDPD5Q8WTR4 605 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 MBOAT7Q96N66 472 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 ZNF396Q96N95 335 aaPredicted RBP4.41□□□□□ -1.7
CLK1-203ENST00000409769 PARK7Q99497 189 aaKnown RBP4.41□□□□□ -1.7
CLK1-203ENST00000409769 MOV10L1Q9BXT6 1211 aaKnown RBP4.41□□□□□ -1.7
CLK1-203ENST00000409769 NPFFR1Q9GZQ6 430 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 SPATC1LQ9H0A9 340 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 MORF4L1Q9UBU8 362 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 RCOR1Q9UKL0 485 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 CFAP45Q9UL16 551 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 ABT1Q9ULW3 272 aaKnown RBP4.41□□□□□ -1.7
CLK1-203ENST00000409769 RABGAP1Q9Y3P9 1069 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 PCDHGB5Q9Y5G0 923 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 INSL5Q9Y5Q6 135 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 CLIC4Q9Y696 253 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 CASP8AP2Q9UKL3 1982 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 ZSWIM8A7E2V4 1837 aa4.41□□□□□ -1.7
CLK1-203ENST00000409769 LOC102724159A0A0B4J2E5 919 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 WNT9BO14905 357 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 FIBPO43427 364 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 SLC25A27O95847 323 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 POLBP06746 335 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 CD72P21854 359 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 CNTFP26441 200 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 HOXA13P31271 388 aaPredicted RBP4.4□□□□□ -1.71
CLK1-203ENST00000409769 COPB2P35606 906 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 ART1P52961 327 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 PMS2P54278 862 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 SREBF2Q12772 1141 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 BAATQ14032 418 aaPredicted RBP4.4□□□□□ -1.71
CLK1-203ENST00000409769 NONOQ15233 471 aaKnown RBP eCLIP4.4□□□□□ -1.71
CLK1-203ENST00000409769 PWP2Q15269 919 aaKnown RBP4.4□□□□□ -1.71
CLK1-203ENST00000409769 PALB2Q86YC2 1186 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 C4orf32Q8N8J7 132 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 RASSF8Q8NHQ8 419 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 TBCKQ8TEA7 893 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 HTRA1Q92743 480 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 OTULINQ96BN8 352 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 MTMR9Q96QG7 549 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 LHPPQ9H008 270 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 CYP39A1Q9NYL5 469 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 NDRG3Q9UGV2 375 aa4.4□□□□□ -1.71
CLK1-203ENST00000409769 ICAM5Q9UMF0 924 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms