RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 OR56A4Q8NGH8 313 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 TUBGCP3Q96CW5 907 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 MCCC1Q96RQ3 725 aaPredicted RBP19.88■□□□□ 0.77
USP39-204ENST00000409766 HTATIP2Q9BUP3 242 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 CRLS1Q9UJA2 301 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 NRP2O60462 931 aa19.87■□□□□ 0.77
USP39-204ENST00000409766 VPS4BO75351 444 aa19.87■□□□□ 0.77
USP39-204ENST00000409766 CRCPO75575 148 aa19.87■□□□□ 0.77
USP39-204ENST00000409766 SLC25A14O95258 325 aaPredicted RBP19.87■□□□□ 0.77
USP39-204ENST00000409766 POP4O95707 220 aaKnown RBP19.87■□□□□ 0.77
USP39-204ENST00000409766 UROSP10746 265 aa19.87■□□□□ 0.77
USP39-204ENST00000409766 LBPP18428 481 aa19.87■□□□□ 0.77
USP39-204ENST00000409766 ITGB6P18564 788 aa19.87■□□□□ 0.77
USP39-204ENST00000409766 MSX2P35548 267 aaPredicted RBP19.87■□□□□ 0.77
USP39-204ENST00000409766 MS4A2Q01362 244 aa19.87■□□□□ 0.77
USP39-204ENST00000409766 LRRC66Q68CR7 880 aa19.87■□□□□ 0.77
USP39-204ENST00000409766 USP45Q70EL2 814 aa19.87■□□□□ 0.77
USP39-204ENST00000409766 NXPE1Q8N323 547 aa19.87■□□□□ 0.77
USP39-204ENST00000409766 LINC00597Q9H2U6 94 aa19.87■□□□□ 0.77
USP39-204ENST00000409766 ADAMTS6Q9UKP5 1117 aa19.87■□□□□ 0.77
USP39-204ENST00000409766 PLXNB3Q9ULL4 1909 aa19.87■□□□□ 0.77
USP39-204ENST00000409766 MYO7AQ13402 2215 aa19.87■□□□□ 0.77
USP39-204ENST00000409766 TLL1O43897 1013 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 PRR35P0CG20 571 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 HGFP14210 728 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 TYRP14679 529 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 PTSQ03393 145 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 FLOT2Q14254 428 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 RBBP7Q16576 425 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 KIF19Q2TAC6 998 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 GPRC6AQ5T6X5 926 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 FRA10AC1Q70Z53 315 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 ZNF641Q96N77 438 aaPredicted RBP19.86■□□□□ 0.77
USP39-204ENST00000409766 ZNF382Q96SR6 550 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 ZDHHC6Q9H6R6 413 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 SPHK2Q9NRA0 654 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 LRCH1Q9Y2L9 728 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 TRIM16O95361 564 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 LHCGRP22888 699 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 RGS4P49798 205 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 CLNS1AP54105 237 aaKnown RBP19.86■□□□□ 0.77
USP39-204ENST00000409766 PCBP2Q15366 365 aaKnown RBP eCLIP19.86■□□□□ 0.77
USP39-204ENST00000409766 ZNF77Q15935 545 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 XKR7Q5GH72 579 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 OGFOD2Q6N063 350 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 HACD2Q6Y1H2 254 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 GPRIN3Q6ZVF9 776 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 EFL1Q7Z2Z2 1120 aaKnown RBP19.86■□□□□ 0.77
USP39-204ENST00000409766 ADIPOR2Q86V24 386 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 ASIC4Q96FT7 647 aa19.86■□□□□ 0.77
USP39-204ENST00000409766 SDR39U1Q9NRG7 319 aaPredicted RBP19.86■□□□□ 0.77
USP39-204ENST00000409766 TSR3Q9UJK0 312 aaKnown RBP19.86■□□□□ 0.77
USP39-204ENST00000409766 SOBPA7XYQ1 873 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 E7ENX8 843 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 ACOT8O14734 319 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 MRASO14807 208 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 BCAS2O75934 225 aaPredicted RBP19.85■□□□□ 0.77
USP39-204ENST00000409766 DGKAP23743 735 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 HOXA9P31269 272 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 C8orf82Q6P1X6 216 aaPredicted RBP19.85■□□□□ 0.77
USP39-204ENST00000409766 MIER2Q8N344 545 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 PDPRQ8NCN5 879 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 MICAL1Q8TDZ2 1067 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 GDPD5Q8WTR4 605 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 ADA2Q9NZK5 511 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 BCAP29Q9UHQ4 241 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 TNPO3Q9Y5L0 923 aaKnown RBP19.85■□□□□ 0.77
USP39-204ENST00000409766 TRIM38O00635 465 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 GIPC1O14908 333 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 FFAR2O15552 330 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 MATN4O95460 622 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 CHEK2O96017 543 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 UGT2B4P06133 528 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 PRSS36Q5K4E3 855 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 LY6G5CQ5SRR4 150 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 ELMSAN1Q6PJG2 1045 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 IZUMO2Q6UXV1 221 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 Q6ZVU0 165 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 MYO1HQ8N1T3 1032 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 ZBTB2Q8N680 514 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 ZNF557Q8N988 423 aaPredicted RBP19.85■□□□□ 0.77
USP39-204ENST00000409766 CHST14Q8NCH0 376 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 OR52B6Q8NGF0 335 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 BRD9Q9H8M2 597 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 BATF3Q9NR55 127 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 TBC1D14Q9P2M4 693 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 ST14Q9Y5Y6 855 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 HCFC2Q9Y5Z7 792 aa19.85■□□□□ 0.77
USP39-204ENST00000409766 RAD51BO15315 384 aa19.84■□□□□ 0.77
USP39-204ENST00000409766 IDO1P14902 403 aa19.84■□□□□ 0.77
USP39-204ENST00000409766 EPCAMP16422 314 aa19.84■□□□□ 0.77
USP39-204ENST00000409766 IRS1P35568 1242 aa19.84■□□□□ 0.77
USP39-204ENST00000409766 IRX1P78414 480 aaPredicted RBP19.84■□□□□ 0.77
USP39-204ENST00000409766 NTHL1P78549 312 aa19.84■□□□□ 0.77
USP39-204ENST00000409766 CAMK1Q14012 370 aa19.84■□□□□ 0.77
USP39-204ENST00000409766 DMC1Q14565 340 aa19.84■□□□□ 0.77
USP39-204ENST00000409766 GSTA3Q16772 222 aa19.84■□□□□ 0.77
USP39-204ENST00000409766 C18orf21Q32NC0 220 aaPredicted RBP19.84■□□□□ 0.77
USP39-204ENST00000409766 TMEM215Q68D42 235 aa19.84■□□□□ 0.77
USP39-204ENST00000409766 ANO7Q6IWH7 933 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms