RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 PRR19A6NJB7 356 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 C9orf172C9J069 976 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 STMND1H3BQB6 276 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 KCNN4O15554 427 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 PSMD3O43242 534 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 PRAMEF10O60809 474 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 EML2O95834 649 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 SLC4A1P02730 911 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 FGF3P11487 239 aaPredicted RBP14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 ITIH1P19827 911 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 STIP1P31948 543 aaKnown RBP14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 HADHAP40939 763 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 HALP42357 657 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 PPM1FP49593 454 aaPredicted RBP14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 MAPK10P53779 464 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 UBE2IP63279 158 aaKnown RBP14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 CFHR1Q03591 330 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 DMPKQ09013 629 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 C19orf57Q0VDD7 668 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 LONRF2Q1L5Z9 754 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 PARP6Q2NL67 630 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 DCAF12Q5T6F0 453 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 TMEM26Q6ZUK4 368 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 AMZ2Q86W34 360 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 ZNF547Q8IVP9 402 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 ZNF398Q8TD17 642 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 ZFPM2Q8WW38 1151 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 NCSTNQ92542 709 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 SPATA13Q96N96 652 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 FRMD8P1Q9BZ68 369 aaPredicted RBP14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 OSGEPL1Q9H4B0 414 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 FBXO8Q9NRD0 319 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 PCYT1BQ9Y5K3 369 aaPredicted RBP14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 ATRXP46100 2492 aa14.31□□□□□ -0.12
NIF3L1-205ENST00000409588 GRID2IPA4D2P6 1211 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 CAPN5O15484 640 aaPredicted RBP14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 AGTP01019 485 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 ANKRD34CP0C6C1 535 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 ADRA1AP35348 466 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 ATP1A2P50993 1020 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 NFATC2Q13469 925 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 CHRNA6Q15825 494 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 MANEAQ5SRI9 462 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 CYB5D1Q6P9G0 228 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 GAS2L3Q86XJ1 694 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 TRAPPC5Q8IUR0 188 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 TMEM139Q8IV31 216 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 TRIM48Q8IWZ4 208 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 KLHDC8BQ8IXV7 354 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 ALG3Q92685 438 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 BBC3Q96PG8 261 aaPredicted RBP14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 TSGA10Q9BZW7 698 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 RAB33BQ9H082 229 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 ZMYND15Q9H091 742 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 SLC40A1Q9NP59 571 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 SLC39A1Q9NY26 324 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 SLC23A2Q9UGH3 650 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 TMPRSS11EQ9UL52 423 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 ACSL5Q9ULC5 683 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 KIF26BQ2KJY2 2108 aa14.3□□□□□ -0.12
NIF3L1-205ENST00000409588 MACROD2A1Z1Q3 448 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 AGAP14A8MT82 685 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 PDZK1P1A8MUH7 402 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 POP7O75817 140 aaKnown RBP14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 UBXN7O94888 489 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 ITGB2P05107 769 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 RALBP11234 206 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 CCL4P13236 92 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 MSH3P20585 1137 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 ETV5P41161 510 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 SLC19A1P41440 591 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 CHRNA4P43681 627 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 GSDMDP57764 484 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 MC2RQ01718 297 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 P3H1Q32P28 736 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 GPR33Q49SQ1 333 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 TAF1BQ53T94 588 aaPredicted RBP14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 ZNF648Q5T619 568 aaPredicted RBP14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 KLHL35Q6PF15 583 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 CRTC3Q6UUV7 619 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 CEACAM20Q6UY09 585 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 C11orf96Q7Z7L8 435 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 ZNF454Q8N9F8 522 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 RCBTB1Q8NDN9 531 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 ACRBPQ8NEB7 543 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 ULK4Q96C45 1275 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 CXorf40BQ96DE9 158 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 SGF29Q96ES7 293 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 HES6Q96HZ4 224 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 TRIT1Q9H3H1 467 aaKnown RBP14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 ARFGAP3Q9NP61 516 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 ZNF624Q9P2J8 865 aaPredicted RBP14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 EPHA6Q9UF33 1036 aa14.29□□□□□ -0.12
NIF3L1-205ENST00000409588 KRT86O43790 486 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 ZFC3H1O60293 1989 aaKnown RBP14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 UGT1A9O60656 530 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 SRP72O76094 671 aaKnown RBP14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 C9P02748 559 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 SFTPCP11686 197 aa14.28□□□□□ -0.12
NIF3L1-205ENST00000409588 AMD1P17707 334 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms