RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 ILF2Q12905 390 aaKnown RBP16.37■□□□□ 0.21
COL23A1-202ENST00000407622 ADRM1Q16186 407 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 C6orf136Q5SQH8 315 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 SLC2A7Q6PXP3 512 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 Q6ZSR9 355 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 GPRIN3Q6ZVF9 776 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 GPSM1Q86YR5 675 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 CAMK1DQ8IU85 385 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 ABI1Q8IZP0 508 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 TMEM199Q8N511 208 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 TRPV3Q8NET8 790 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 PROKR1Q8TCW9 393 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 NUSAP1Q9BXS6 441 aaKnown RBP16.37■□□□□ 0.21
COL23A1-202ENST00000407622 SOX17Q9H6I2 414 aaPredicted RBP16.37■□□□□ 0.21
COL23A1-202ENST00000407622 CLK4Q9HAZ1 481 aaKnown RBP16.37■□□□□ 0.21
COL23A1-202ENST00000407622 PLXNA4Q9HCM2 1894 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 RNF103-CHMP3A0A140T963 221 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 EI24O14681 340 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 COCHO43405 550 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 IRF1P10914 325 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 PSMA3P25788 255 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 ARF5P84085 180 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 MERTKQ12866 999 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 PABPC1LQ4VXU2 614 aaKnown RBP16.37■□□□□ 0.21
COL23A1-202ENST00000407622 NANOGP8Q6NSW7 305 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 ZNF786Q8N393 782 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 FNDC5Q8NAU1 212 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 SLC43A3Q8NBI5 491 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 OR56A4Q8NGH8 313 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 CENPNQ96H22 339 aaPredicted RBP16.37■□□□□ 0.21
COL23A1-202ENST00000407622 RPF2Q9H7B2 306 aaKnown RBP16.37■□□□□ 0.21
COL23A1-202ENST00000407622 NANOGQ9H9S0 305 aa16.37■□□□□ 0.21
COL23A1-202ENST00000407622 RSL24D1Q9UHA3 163 aaKnown RBP16.37■□□□□ 0.21
COL23A1-202ENST00000407622 TRMUO75648 421 aaKnown RBP16.36■□□□□ 0.21
COL23A1-202ENST00000407622 MLYCDO95822 493 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 HRH2P25021 359 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 CORO1AP31146 461 aaKnown RBP16.36■□□□□ 0.21
COL23A1-202ENST00000407622 CA5AP35218 305 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 SLC11A2P49281 568 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 KPNA1P52294 538 aaPredicted RBP16.36■□□□□ 0.21
COL23A1-202ENST00000407622 SH3BGRP55822 239 aaPredicted RBP16.36■□□□□ 0.21
COL23A1-202ENST00000407622 IL2P60568 153 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 ERVK-8P63133 956 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 TGFBIQ15582 683 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 ACBD5Q5T8D3 534 aaPredicted RBP16.36■□□□□ 0.21
COL23A1-202ENST00000407622 RNF219Q5W0B1 726 aaPredicted RBP16.36■□□□□ 0.21
COL23A1-202ENST00000407622 TAS2R42Q7RTR8 314 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 ARHGAP22Q7Z5H3 698 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 PTRH1Q86Y79 214 aaKnown RBP16.36■□□□□ 0.21
COL23A1-202ENST00000407622 SFRP1Q8N474 314 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 TTC30BQ8N4P2 665 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 TTC16Q8NEE8 873 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 EID2BQ96D98 161 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 BEGAINQ9BUH8 593 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 STX7O15400 261 aaKnown RBP16.36■□□□□ 0.21
COL23A1-202ENST00000407622 SYNCRIPO60506 623 aaKnown RBP16.36■□□□□ 0.21
COL23A1-202ENST00000407622 ALDH2P05091 517 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 MYF6P23409 242 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 OR4D2P58180 307 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 SELPLGQ14242 412 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 TCTN1Q2MV58 587 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 CXorf57Q6NSI4 855 aaKnown RBP16.36■□□□□ 0.21
COL23A1-202ENST00000407622 TXNDC11Q6PKC3 985 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 SPRED1Q7Z699 444 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 RALGPS2Q86X27 583 aaPredicted RBP16.36■□□□□ 0.21
COL23A1-202ENST00000407622 OFCC1Q8IZS5 231 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 PACRGLQ8N7B6 248 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 CYGBQ8WWM9 190 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 SEPHS2Q99611 448 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 TTLL2Q9BWV7 592 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 STARD7Q9NQZ5 370 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 LEF1Q9UJU2 399 aaPredicted RBP16.36■□□□□ 0.21
COL23A1-202ENST00000407622 SLC8A2Q9UPR5 921 aa16.36■□□□□ 0.21
COL23A1-202ENST00000407622 ARIH1Q9Y4X5 557 aaPredicted RBP16.36■□□□□ 0.21
COL23A1-202ENST00000407622 CLDN11O75508 207 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 STC2O76061 302 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 TMCC1O94876 653 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 CHEK2O96017 543 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 CDK4P11802 303 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 RFC2P35250 354 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 ARL1P40616 181 aaPredicted RBP16.35■□□□□ 0.21
COL23A1-202ENST00000407622 MRPL19P49406 292 aaKnown RBP16.35■□□□□ 0.21
COL23A1-202ENST00000407622 TTPAP49638 278 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 CLCN7P51798 805 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 CTBSQ01459 385 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 GPNMBQ14956 572 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 SLC36A3Q495N2 470 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 PDCD4Q53EL6 469 aaKnown RBP16.35■□□□□ 0.21
COL23A1-202ENST00000407622 LPCAT2Q7L5N7 544 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 HM13Q8TCT9 377 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 TSPEARQ8WU66 669 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 ACTL8Q9H568 366 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.35■□□□□ 0.21
COL23A1-202ENST00000407622 ILVBLA1L0T0 632 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 ZNF840PA6NDX5 716 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 E5RI56 91 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 NBNO60934 754 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 RSL1D1O76021 490 aaKnown RBP16.35■□□□□ 0.21
COL23A1-202ENST00000407622 RASAL1O95294 804 aa16.35■□□□□ 0.21
COL23A1-202ENST00000407622 GPIP06744 558 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms