RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 KIAA1328Q86T90 577 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 CDKL3Q8IVW4 592 aaPredicted RBP18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 CCDC110Q8TBZ0 833 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 DTX3LQ8TDB6 740 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 SLC39A1Q9NY26 324 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 KLHL3Q9UH77 587 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 PACSIN2Q9UNF0 486 aaPredicted RBP18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 PKP3Q9Y446 797 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 PCDHGA3Q9Y5H0 932 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 ARL5AQ9Y689 179 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 BSNQ9UPA5 3926 aa18.98■□□□□ 0.63
SMARCB1-204ENST00000407422 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 ANXA9O76027 345 aa18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 WT1P19544 449 aaPredicted RBP18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 CD82P27701 267 aa18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 ADRA1AP35348 466 aa18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 CTSCP53634 463 aa18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 LY6DQ14210 128 aa18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 MANEAQ5SRI9 462 aa18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 ZDHHC20Q5W0Z9 365 aa18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 RANBP10Q6VN20 620 aa18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 ZNF843Q8N446 348 aa18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 BMPERQ8N8U9 685 aa18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 RASGEF1AQ8N9B8 481 aa18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 TTC25Q96NG3 672 aa18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 DESI2Q9BSY9 194 aa18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 SEMA4CQ9C0C4 833 aa18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 OGFRQ9NZT2 677 aa18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 PCDHB11Q9Y5F2 797 aa18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 SLC30A1Q9Y6M5 507 aa18.97■□□□□ 0.63
SMARCB1-204ENST00000407422 LILRA5A6NI73 299 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 OR52A4PA6NMU1 304 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 STMND1H3BQB6 276 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 TJP3O95049 919 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 VIPP01282 170 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 C19orf57Q0VDD7 668 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 GTF2H3Q13889 308 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 GPRC6AQ5T6X5 926 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 ANKS6Q68DC2 871 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 ABRAXAS1Q6UWZ7 409 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 TMEM26Q6ZUK4 368 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 TRIM48Q8IWZ4 208 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 AVL9Q8NBF6 648 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 CCDC112Q8NEF3 446 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 BRSK1Q8TDC3 778 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 WDR37Q9Y2I8 494 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 KCTD3Q9Y597 815 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 B4E171 279 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 STX7O15400 261 aaKnown RBP18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 TYRP1P17643 537 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 IDSP22304 550 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 TSPAN7P41732 249 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 GFERP55789 205 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 CLCA4Q14CN2 919 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 PEX26Q7Z412 305 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 SPC24Q8NBT2 197 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 DDHD1Q8NEL9 900 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 NAT14Q8WUY8 206 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 WBP1Q96G27 269 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 SPATA13Q96N96 652 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 CTRCQ99895 268 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 FERMT1Q9BQL6 677 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 DDA1Q9BW61 102 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 UCK1Q9HA47 277 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 AMFRQ9UKV5 643 aa18.96■□□□□ 0.63
SMARCB1-204ENST00000407422 OR2AG2A6NM03 316 aa18.95■□□□□ 0.62
SMARCB1-204ENST00000407422 PPFIA2O75334 1257 aa18.95■□□□□ 0.62
SMARCB1-204ENST00000407422 FTCDO95954 541 aa18.95■□□□□ 0.62
SMARCB1-204ENST00000407422 CETN2P41208 172 aa18.95■□□□□ 0.62
SMARCB1-204ENST00000407422 LDLRAP1Q5SW96 308 aa18.95■□□□□ 0.62
SMARCB1-204ENST00000407422 AGAP9Q5VTM2 703 aa18.95■□□□□ 0.62
SMARCB1-204ENST00000407422 WASH2PQ6VEQ5 465 aa18.95■□□□□ 0.62
SMARCB1-204ENST00000407422 OR4K2Q8NGD2 314 aa18.95■□□□□ 0.62
SMARCB1-204ENST00000407422 NKD1Q969G9 470 aa18.95■□□□□ 0.62
SMARCB1-204ENST00000407422 SGF29Q96ES7 293 aa18.95■□□□□ 0.62
SMARCB1-204ENST00000407422 EPB41L1Q9H4G0 881 aa18.95■□□□□ 0.62
SMARCB1-204ENST00000407422 WASH6PQ9NQA3 447 aa18.95■□□□□ 0.62
SMARCB1-204ENST00000407422 AAR2Q9Y312 384 aaKnown RBP18.95■□□□□ 0.62
SMARCB1-204ENST00000407422 POP7O75817 140 aaKnown RBP18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 STK10O94804 968 aaKnown RBP18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 UBXN7O94888 489 aa18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 PRAMEF1O95521 474 aa18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 LPOP22079 712 aaPredicted RBP18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 MSLNQ13421 630 aaPredicted RBP18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 ITGA9Q13797 1035 aa18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 SPARCL1Q14515 664 aa18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 PRPSAP1Q14558 356 aa18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 TAF1AQ15573 450 aaPredicted RBP18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 DCAF12Q5T6F0 453 aa18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 TMEM220Q6QAJ8 160 aa18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 FAM83HQ6ZRV2 1179 aaPredicted RBP18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 AMZ2Q86W34 360 aa18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 ZNF398Q8TD17 642 aa18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 ASPSCR1Q9BZE9 553 aa18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 SLC40A1Q9NP59 571 aa18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 FKBPLQ9UIM3 349 aa18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 PCDHGA4Q9Y5G9 962 aa18.94■□□□□ 0.62
SMARCB1-204ENST00000407422 MN1Q10571 1320 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms