RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ZNF674Q2M3X9 581 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 FAM98BQ52LJ0 330 aaKnown RBP4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 ODF2Q5BJF6 829 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 C6orf163Q5TEZ5 329 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 FAM198BQ6UWH4 519 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 ADCK2Q7Z695 626 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 CCDC91Q7Z6B0 441 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 CCAR2Q8N163 923 aaKnown RBP4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 B4GALNT2Q8NHY0 566 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 GRK7Q8WTQ7 553 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 TMEM174Q8WUU8 243 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 KCNE4Q8WWG9 221 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 APBB2Q92870 758 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 URB1-AS1Q96HZ7 61 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 NEK1Q96PY6 1258 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 HAUS8Q9BT25 410 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 TASP1Q9H6P5 420 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 PRMT7Q9NVM4 692 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 TAS2R14Q9NYV8 317 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 RCOR1Q9UKL0 485 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 ACAD8Q9UKU7 415 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 LIPT1Q9Y234 373 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 PCDHGA5Q9Y5G8 931 aa4.86□□□□□ -1.63
HMGB1P13-201ENST00000406019 A4D1N5 150 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 ENO4A6NNW6 628 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 KDM4EB2RXH2 506 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 H0YIN7 160 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 LDB2O43679 373 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 PLPP2O43688 288 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 ZFYP08048 801 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 G6PDP11413 515 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 GJA1P17302 382 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 HNRNPH1P31943 449 aaKnown RBP4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 MATR3P43243 847 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 RASSF2P50749 326 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 ALDH3A2P51648 485 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 BMXP51813 675 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 LIMK1P53667 647 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 SELENOVP59797 346 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 MVPQ14764 893 aaKnown RBP4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 VWC2Q2TAL6 325 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 EIF2S3LQ2VIR3 472 aaKnown RBP4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 CCDC92Q53HC0 331 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 Q5PR19 223 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 PLA2G4FQ68DD2 849 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 ZNF549Q6P9A3 640 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 MSANTD1Q6ZTZ1 278 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 TPRG1Q6ZUI0 275 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 SPATA19Q7Z5L4 167 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 NRROSQ86YC3 692 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 UNC45BQ8IWX7 931 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 BEST3Q8N1M1 668 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 RASGEF1CQ8N431 466 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 TMCO5AQ8N6Q1 288 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 MOSPD2Q8NHP6 518 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 ASB5Q8WWX0 329 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 GRAMD2BQ96HH9 432 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 DDOQ99489 341 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 GFI1Q99684 422 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 EGFL8Q99944 293 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 MLPHQ9BV36 600 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 FUT8Q9BYC5 575 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 SPRY4Q9C004 299 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 SEBOXQ9HB31 216 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 SIRT3Q9NTG7 399 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 STK39Q9UEW8 545 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 GPRASP1Q5JY77 1395 aa4.85□□□□□ -1.63
HMGB1P13-201ENST00000406019 ARHGEF37A1IGU5 675 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 CLEC18AA5D8T8 446 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 J3KR12 359 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 CLIC2O15247 247 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 PRAMEF11O60813 436 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 OR52Z1P0C646 297 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 SUPT20HL2P0C7V6 817 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 SNHG28P0DPA3 235 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 SCP2P22307 547 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 TCEA1P23193 301 aaKnown RBP4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 DNASE1P24855 282 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 NMBRP28336 390 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 HNF4AP41235 474 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 APOBEC1P41238 236 aaKnown RBP4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 FASLGP48023 281 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 CAPZA1P52907 286 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 PPP2R2BQ00005 443 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 YWHAHQ04917 246 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 RBPJQ06330 500 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 KRT33BQ14525 404 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 EFNB3Q15768 340 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 DECR1Q16698 335 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 ZNF284Q2VY69 593 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 KLHL26Q53HC5 615 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 PPP6R3Q5H9R7 873 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 C6orf136Q5SQH8 315 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 FRG2Q64ET8 278 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 B3GNT6Q6ZMB0 384 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 PPP1R21Q6ZMI0 780 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 SLC16A12Q6ZSM3 486 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 GET4Q7L5D6 327 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 OTOAQ7RTW8 1153 aa4.84□□□□□ -1.63
HMGB1P13-201ENST00000406019 TRAPPC11Q7Z392 1133 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms