RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 PARP8Q8N3A8 854 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 TEX26Q8N6G2 289 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 OR56A4Q8NGH8 313 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 KIAA1191Q96A73 305 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 L3HYPDHQ96EM0 354 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 RMND5BQ96G75 393 aaPredicted RBP4.31□□□□□ -1.72
SMC6-203ENST00000402989 AURKBQ96GD4 344 aaPredicted RBP4.31□□□□□ -1.72
SMC6-203ENST00000402989 DEFB118Q96PH6 123 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 BTBD9Q96Q07 612 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 PSKH2Q96QS6 385 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 TRMOQ9BU70 441 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 BEGAINQ9BUH8 593 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 FAM192AQ9GZU8 254 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 ALG2Q9H553 416 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 VCX3AQ9NNX9 186 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 HMX1Q9NP08 348 aaPredicted RBP4.31□□□□□ -1.72
SMC6-203ENST00000402989 EXD2Q9NVH0 621 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 ZDHHC7Q9NXF8 308 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 SUCOQ9UBS9 1254 aaKnown RBP4.31□□□□□ -1.72
SMC6-203ENST00000402989 VPS51Q9UID3 782 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 RNF11Q9Y3C5 154 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 CPQQ9Y646 472 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 U3KQV3 271 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 PATJQ8NI35 1801 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 A0A1B0GVM2 712 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 TYW5A2RUC4 315 aaKnown RBP4.31□□□□□ -1.72
SMC6-203ENST00000402989 H7C4K7 107 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 GNGT2O14610 69 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 TRIM24O15164 1050 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 PFDN6O15212 129 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 HTRA2O43464 458 aaPredicted RBP4.31□□□□□ -1.72
SMC6-203ENST00000402989 CLDN11O75508 207 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 NR4A1P22736 598 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 FASP25445 335 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 RPL5P46777 297 aaKnown RBP4.31□□□□□ -1.72
SMC6-203ENST00000402989 ERVPABLB-1P60509 514 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 HSPA14Q0VDF9 509 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 COL9A2Q14055 689 aaPredicted RBP4.31□□□□□ -1.72
SMC6-203ENST00000402989 SELPLGQ14242 412 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 TGFBIQ15582 683 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 AP5B1Q2VPB7 878 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 SETMARQ53H47 684 aaPredicted RBP4.31□□□□□ -1.72
SMC6-203ENST00000402989 LPCAT2Q7L5N7 544 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 NPAS4Q8IUM7 802 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 CLVS1Q8IUQ0 354 aaPredicted RBP4.31□□□□□ -1.72
SMC6-203ENST00000402989 CMTR2Q8IYT2 770 aaKnown RBP4.31□□□□□ -1.72
SMC6-203ENST00000402989 CLEC4FQ8N1N0 589 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 RNF175Q8N4F7 328 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 OR4F6Q8NGB9 312 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 ZFP28Q8NHY6 868 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 CD200R1Q8TD46 325 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 ABTB1Q969K4 478 aaPredicted RBP4.31□□□□□ -1.72
SMC6-203ENST00000402989 MYO19Q96H55 970 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 TMEM169Q96HH4 297 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 HIC2Q96JB3 615 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 MGME1Q9BQP7 344 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.31□□□□□ -1.724e-8■□□□□ 9.9
SMC6-203ENST00000402989 TFB2MQ9H5Q4 396 aaKnown RBP4.31□□□□□ -1.72
SMC6-203ENST00000402989 IPPKQ9H8X2 491 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 PDFQ9HBH1 243 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 LTB4R2Q9NPC1 389 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 SRRDQ9UH36 339 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 ZNF225Q9UK10 706 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 PCTPQ9UKL6 214 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 RAB26Q9ULW5 256 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 CLEC4EQ9ULY5 219 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 VPS4AQ9UN37 437 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 MED16Q9Y2X0 877 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 ZNF711Q9Y462 761 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 YIPF1Q9Y548 306 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 PRSS21Q9Y6M0 314 aa4.31□□□□□ -1.72
SMC6-203ENST00000402989 KNL1Q8NG31 2342 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 ARVCFO00192 962 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 AXIN1O15169 862 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 CLOCKO15516 846 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 KDELR3O43731 214 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 SEC22BO75396 215 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 IDO1P14902 403 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 ZNF26P17031 533 aaPredicted RBP4.3□□□□□ -1.72
SMC6-203ENST00000402989 OGNP20774 298 aaKnown RBP4.3□□□□□ -1.72
SMC6-203ENST00000402989 SLC6A2P23975 617 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 GABRR2P28476 465 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 PCSK6P29122 969 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 IL12AP29459 219 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 ADSLP30566 484 aaPredicted RBP4.3□□□□□ -1.72
SMC6-203ENST00000402989 SLC7A1P30825 629 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 AKT1P31749 480 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 CTSOP43234 321 aaPredicted RBP4.3□□□□□ -1.72
SMC6-203ENST00000402989 GSSP48637 474 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 TTPAP49638 278 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 NEK2P51955 445 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 LAPTM4AQ15012 233 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 ABRAXAS2Q15018 415 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 PHKG1Q16816 387 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 USP41Q3LFD5 358 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 GTDC1Q4AE62 458 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 ADGRF1Q5T601 910 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 ZNF648Q5T619 568 aaPredicted RBP4.3□□□□□ -1.72
SMC6-203ENST00000402989 KANK2Q63ZY3 851 aa4.3□□□□□ -1.72
SMC6-203ENST00000402989 TRAF7Q6Q0C0 670 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms