RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 DYRK4Q9NR20 520 aa25.29■■□□□ 1.64
CPNE1-205ENST00000401607 TSR3Q9UJK0 312 aaKnown RBP25.29■■□□□ 1.64
CPNE1-205ENST00000401607 COQ6Q9Y2Z9 468 aa25.29■■□□□ 1.64
CPNE1-205ENST00000401607 LRRC14BA6NHZ5 514 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 MTX2O75431 263 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 SUPT7LO94864 414 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 GALNT1Q10472 559 aaPredicted RBP25.28■■□□□ 1.64
CPNE1-205ENST00000401607 FAM91A1Q658Y4 838 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 SUGP1Q8IWZ8 645 aaKnown RBP25.28■■□□□ 1.64
CPNE1-205ENST00000401607 DDHD1Q8NEL9 900 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 AP2M1Q96CW1 435 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 PANX3Q96QZ0 392 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 HDAC8Q9BY41 377 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 TNFRSF12AQ9NP84 129 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 LRRK1Q38SD2 2015 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 HDAC3O15379 428 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 DIAPH2O60879 1101 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 OR56A5P0C7T3 313 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 T-ENOLP0DO92 83 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 ATP1B2P14415 290 aaPredicted RBP25.28■■□□□ 1.64
CPNE1-205ENST00000401607 DGKAP23743 735 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 AKT1P31749 480 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 P2RY2P41231 377 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 RGS4P49798 205 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 CAMK2GQ13555 558 aaPredicted RBP25.28■■□□□ 1.64
CPNE1-205ENST00000401607 TMEM52BQ4KMG9 183 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 SLC9B1Q4ZJI4 515 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 DET1Q7L5Y6 550 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 CYP2U1Q7Z449 544 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 RAB44Q7Z6P3 723 aaPredicted RBP25.28■■□□□ 1.64
CPNE1-205ENST00000401607 VPS35Q96QK1 796 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 TRMOQ9BU70 441 aa25.28■■□□□ 1.64
CPNE1-205ENST00000401607 TMEM233B4DJY2 109 aa25.27■■□□□ 1.64
CPNE1-205ENST00000401607 UBFD1O14562 309 aaKnown RBP25.27■■□□□ 1.64
CPNE1-205ENST00000401607 UNC5CO95185 931 aa25.27■■□□□ 1.64
CPNE1-205ENST00000401607 CTHP32929 405 aa25.27■■□□□ 1.64
CPNE1-205ENST00000401607 SEC13P55735 322 aa25.27■■□□□ 1.64
CPNE1-205ENST00000401607 CNTN1Q12860 1018 aa25.27■■□□□ 1.64
CPNE1-205ENST00000401607 SH2D4BQ5SQS7 431 aa25.27■■□□□ 1.64
CPNE1-205ENST00000401607 SEL1L3Q68CR1 1132 aa25.27■■□□□ 1.64
CPNE1-205ENST00000401607 SBSNQ6UWP8 590 aa25.27■■□□□ 1.64
CPNE1-205ENST00000401607 CUZD1Q86UP6 607 aa25.27■■□□□ 1.64
CPNE1-205ENST00000401607 GPSM1Q86YR5 675 aa25.27■■□□□ 1.64
CPNE1-205ENST00000401607 BTN2A2Q8WVV5 523 aa25.27■■□□□ 1.64
CPNE1-205ENST00000401607 RSPH9Q9H1X1 276 aaPredicted RBP25.27■■□□□ 1.64
CPNE1-205ENST00000401607 EML4Q9HC35 981 aaKnown RBP25.27■■□□□ 1.64
CPNE1-205ENST00000401607 KLHL42Q9P2K6 505 aa25.27■■□□□ 1.64
CPNE1-205ENST00000401607 CKAP5Q14008 2032 aa25.27■■□□□ 1.64
CPNE1-205ENST00000401607 PIKFYVEQ9Y2I7 2098 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 C2CD4DB7Z1M9 353 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 SPECC1L-ADORA2AF8WAN1 911 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 SLCO1B7G3V0H7 640 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 SGTAO43765 313 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 MAGEC1O60732 1142 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 CBX6O95503 412 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 SERPINA6P08185 405 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 C6P13671 934 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 TARSP26639 723 aaKnown RBP25.26■■□□□ 1.63
CPNE1-205ENST00000401607 CCR7P32248 378 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 TIE1P35590 1138 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 PIP5KL1Q5T9C9 394 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 FAM46CQ5VWP2 391 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 MYO1HQ8N1T3 1032 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 DCUN1D1Q96GG9 259 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 SAR1AQ9NR31 198 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 KCTD5Q9NXV2 234 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 ARMCX1Q9P291 453 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 VTI1BQ9UEU0 232 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 APOBEC2Q9Y235 224 aaKnown RBP25.26■■□□□ 1.63
CPNE1-205ENST00000401607 NCF1BA6NI72 391 aaPredicted RBP25.26■■□□□ 1.63
CPNE1-205ENST00000401607 NCF1CA8MVU1 366 aaPredicted RBP25.26■■□□□ 1.63
CPNE1-205ENST00000401607 STX16-NPEPL1H3BU86 382 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 MYO1CO00159 1063 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 STX16O14662 325 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 NPC1O15118 1278 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 CCDC22O60826 627 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 MMP20O60882 483 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 DNAJC8O75937 253 aaPredicted RBP25.26■■□□□ 1.63
CPNE1-205ENST00000401607 RECQL5O94762 991 aaPredicted RBP25.26■■□□□ 1.63
CPNE1-205ENST00000401607 NCF1P14598 390 aaPredicted RBP25.26■■□□□ 1.63
CPNE1-205ENST00000401607 TSPAN8P19075 237 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 DRD3P35462 400 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 CDH13P55290 713 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 SATB1Q01826 763 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 CREB5Q02930 508 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 TGFBIQ15582 683 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 TTLL9Q3SXZ7 439 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 C2orf27AQ580R0 203 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 ZNF648Q5T619 568 aaPredicted RBP25.26■■□□□ 1.63
CPNE1-205ENST00000401607 CYHR1Q6ZMK1 362 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 ADAMTSL2Q86TH1 951 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 PELI3Q8N2H9 469 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 GLYATL1Q969I3 302 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 TXLNGQ9NUQ3 528 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 FADS3Q9Y5Q0 445 aa25.26■■□□□ 1.63
CPNE1-205ENST00000401607 SOD1P00441 154 aa25.25■■□□□ 1.63
CPNE1-205ENST00000401607 JUNP05412 331 aaKnown RBP25.25■■□□□ 1.63
CPNE1-205ENST00000401607 RPS17P08708 135 aaKnown RBP25.25■■□□□ 1.63
CPNE1-205ENST00000401607 EEF1DP29692 281 aaKnown RBP25.25■■□□□ 1.63
CPNE1-205ENST00000401607 ALDH18A1P54886 795 aaKnown RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms