RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 SIGLEC6O43699 453 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 MTX2O75431 263 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 VAPBO95292 243 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 CKMT1AP12532 417 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 SLC2A4P14672 509 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 CKMT2P17540 419 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 PRLHRP49683 370 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 ADARP55265 1226 aaKnown RBP17.41■□□□□ 0.38
CTNS-203ENST00000399306 TUBB4BP68371 445 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 TRIP6Q15654 476 aaKnown RBP17.41■□□□□ 0.38
CTNS-203ENST00000399306 LONRF1Q17RB8 773 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 TYSND1Q2T9J0 566 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 BBS9Q3SYG4 887 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 MSS51Q4VC12 460 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 ZNF648Q5T619 568 aaPredicted RBP17.41■□□□□ 0.38
CTNS-203ENST00000399306 STEAP4Q687X5 459 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 TMEM220Q6QAJ8 160 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 WASH2PQ6VEQ5 465 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 CEP128Q6ZU80 1094 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 CENPUQ71F23 418 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 CHST15Q7LFX5 561 aaPredicted RBP17.41■□□□□ 0.38
CTNS-203ENST00000399306 SDCCAG8Q86SQ7 713 aaPredicted RBP17.41■□□□□ 0.38
CTNS-203ENST00000399306 LRRC6Q86X45 466 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 C17orf82Q86X59 251 aaPredicted RBP17.41■□□□□ 0.38
CTNS-203ENST00000399306 TRAPPC5Q8IUR0 188 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 ARL10Q8N8L6 244 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.41■□□□□ 0.38
CTNS-203ENST00000399306 GPR156Q8NFN8 814 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 CNDP2Q96KP4 475 aaKnown RBP17.41■□□□□ 0.38
CTNS-203ENST00000399306 FCRL3Q96P31 734 aaPredicted RBP17.41■□□□□ 0.38
CTNS-203ENST00000399306 CARD6Q9BX69 1037 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 FAM96AQ9H5X1 160 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 ARFGAP3Q9NP61 516 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 WASH6PQ9NQA3 447 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 TAAR2Q9P1P5 351 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 PCDHGA1Q9Y5H4 931 aa17.41■□□□□ 0.38
CTNS-203ENST00000399306 OR51F1A6NGY5 319 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 OR5K4A6NMS3 321 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 FFAR2O15552 330 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 SGTAO43765 313 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 KCNK5O95279 499 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 CELA2BP08218 269 aaPredicted RBP17.4■□□□□ 0.38
CTNS-203ENST00000399306 ACP1P24666 158 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 ACTR1BP42025 376 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 CDKN1CP49918 316 aaPredicted RBP17.4■□□□□ 0.38
CTNS-203ENST00000399306 ACTR1AP61163 376 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 MRPS25P82663 173 aaKnown RBP17.4■□□□□ 0.38
CTNS-203ENST00000399306 CRYMQ14894 314 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 DEFB133Q30KQ1 61 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 AGAP9Q5VTM2 703 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 NEPROQ6NW34 567 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 AMZ2Q86W34 360 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 AVL9Q8NBF6 648 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 FAM46DQ8NEK8 389 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 DEFB124Q8NES8 71 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 OR2L2Q8NH16 312 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 FBXO25Q8TCJ0 367 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 APOLD1Q96LR9 279 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 PCYT1BQ9Y5K3 369 aaPredicted RBP17.4■□□□□ 0.38
CTNS-203ENST00000399306 ST14Q9Y5Y6 855 aa17.4■□□□□ 0.38
CTNS-203ENST00000399306 EME2A4GXA9 379 aaPredicted RBP17.39■□□□□ 0.37
CTNS-203ENST00000399306 MGAT4DA6NG13 374 aa17.39■□□□□ 0.37
CTNS-203ENST00000399306 POP7O75817 140 aaKnown RBP17.39■□□□□ 0.37
CTNS-203ENST00000399306 DKK1O94907 266 aa17.39■□□□□ 0.37
CTNS-203ENST00000399306 GP1BAP07359 652 aa17.39■□□□□ 0.37
CTNS-203ENST00000399306 ACP5P13686 325 aa17.39■□□□□ 0.37
CTNS-203ENST00000399306 PNLIPP16233 465 aa17.39■□□□□ 0.37
CTNS-203ENST00000399306 RPS3P23396 243 aaKnown RBP eCLIP17.39■□□□□ 0.37
CTNS-203ENST00000399306 ELK3P41970 407 aa17.39■□□□□ 0.37
CTNS-203ENST00000399306 NOVA1P51513 510 aaKnown RBP17.39■□□□□ 0.37
CTNS-203ENST00000399306 CTSCP53634 463 aa17.39■□□□□ 0.37
CTNS-203ENST00000399306 NR0B2Q15466 257 aa17.39■□□□□ 0.37
CTNS-203ENST00000399306 INSCQ1MX18 579 aa17.39■□□□□ 0.37
CTNS-203ENST00000399306 DNTTIP2Q5QJE6 756 aaKnown RBP17.39■□□□□ 0.37
CTNS-203ENST00000399306 ZNF449Q6P9G9 518 aa17.39■□□□□ 0.37
CTNS-203ENST00000399306 CES3Q6UWW8 571 aa17.39■□□□□ 0.37
CTNS-203ENST00000399306 ZDHHC24Q6UX98 284 aa17.39■□□□□ 0.37
CTNS-203ENST00000399306 CCL4L1Q8NHW4 92 aa17.39■□□□□ 0.37
CTNS-203ENST00000399306 NAT6Q93015 286 aa17.39■□□□□ 0.37
CTNS-203ENST00000399306 SGF29Q96ES7 293 aa17.39■□□□□ 0.37
CTNS-203ENST00000399306 CAMK1GQ96NX5 476 aa17.39■□□□□ 0.37
CTNS-203ENST00000399306 FAM167BQ9BTA0 163 aa17.39■□□□□ 0.37
CTNS-203ENST00000399306 INTS10Q9NVR2 710 aaKnown RBP17.39■□□□□ 0.37
CTNS-203ENST00000399306 ZC3H7BQ9UGR2 993 aaKnown RBP17.39■□□□□ 0.37
CTNS-203ENST00000399306 LY6G6EA0A0G2JKS1 128 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 KIR2DS5A0A0G2JLQ3 304 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 A0A0G2JNG1 304 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 A6NCN8 305 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 KIR2DS3K7RE56 304 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 PRMT5O14744 637 aaPredicted RBP17.38■□□□□ 0.37
CTNS-203ENST00000399306 FTH1P02794 183 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 GSTA2P09210 222 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 OR56A5P0C7T3 313 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 PRSS56P0CW18 603 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 IDSP22304 550 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 AK4P27144 223 aaPredicted RBP17.38■□□□□ 0.37
CTNS-203ENST00000399306 PMLP29590 882 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 DEKP35659 375 aaKnown RBP17.38■□□□□ 0.37
CTNS-203ENST00000399306 PLTPP55058 493 aa17.38■□□□□ 0.37
CTNS-203ENST00000399306 SLC7A5Q01650 507 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms