RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.73□□□□□ -0.21
SEC13-204ENST00000397099 PDP2Q9P2J9 529 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 PRKAB1Q9Y478 270 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 ARL5AQ9Y689 179 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 ATMQ13315 3056 aa13.73□□□□□ -0.21
SEC13-204ENST00000397099 ATRXP46100 2492 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 IGHV5-10-1A0A0J9YXX1 117 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 PMS2P1A4D2B8 440 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 PRR19A6NJB7 356 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 AGAP14A8MT82 685 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 H7C0S8 307 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 AP3B1O00203 1094 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 THRAP10827 490 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 ITGALP20701 1170 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 PPM1FP49593 454 aaPredicted RBP13.72□□□□□ -0.21
SEC13-204ENST00000397099 RAB15P59190 212 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 UBE2IP63279 158 aaKnown RBP13.72□□□□□ -0.21
SEC13-204ENST00000397099 GPRC6AQ5T6X5 926 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 ARHGAP40Q5TG30 622 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 DRICH1Q6PGQ1 229 aaPredicted RBP13.72□□□□□ -0.21
SEC13-204ENST00000397099 CRTC3Q6UUV7 619 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 USP53Q70EK8 1073 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 JAMLQ86YT9 394 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 ZNF547Q8IVP9 402 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 OR4K2Q8NGD2 314 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 DCUN1D1Q96GG9 259 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 FAM118BQ9BPY3 351 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 NUDT22Q9BRQ3 303 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 ASPSCR1Q9BZE9 553 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 ASB8Q9H765 288 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 VPS37BQ9H9H4 285 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 RDH14Q9HBH5 336 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 CPNE5Q9HCH3 593 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 ARFGAP3Q9NP61 516 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 ACSL5Q9ULC5 683 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 ZNF148Q9UQR1 794 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 PCYT1BQ9Y5K3 369 aaPredicted RBP13.72□□□□□ -0.21
SEC13-204ENST00000397099 SLC30A1Q9Y6M5 507 aa13.72□□□□□ -0.21
SEC13-204ENST00000397099 A0A0U1RQJ8 604 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 TEX51A0A1B0GUA7 166 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 PDZK1P1A8MUH7 402 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 AGRPO00253 132 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 ATXN7O15265 892 aaPredicted RBP13.71□□□□□ -0.21
SEC13-204ENST00000397099 TOX3O15405 576 aaPredicted RBP13.71□□□□□ -0.21
SEC13-204ENST00000397099 LIASO43766 372 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 EML2O95834 649 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 GSTM1P09488 218 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 AKT1P31749 480 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 ZNF140P52738 457 aaPredicted RBP13.71□□□□□ -0.21
SEC13-204ENST00000397099 GSTM4Q03013 218 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 OASLQ15646 514 aaKnown RBP13.71□□□□□ -0.21
SEC13-204ENST00000397099 CCNG2Q16589 344 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 SKIDA1Q1XH10 827 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 FAM182AQ5T1J6 154 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 DENND5AQ6IQ26 1287 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 KLHL35Q6PF15 583 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 SNX20Q7Z614 316 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 C11orf96Q7Z7L8 435 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 CCDC89Q8N998 374 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 LSM14AQ8ND56 463 aaKnown RBP13.71□□□□□ -0.21
SEC13-204ENST00000397099 STYXQ8WUJ0 223 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 ZFPM2Q8WW38 1151 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 SLC39A7Q92504 469 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 LINC00615Q96LM1 132 aaPredicted RBP13.71□□□□□ -0.21
SEC13-204ENST00000397099 TEFMQ96QE5 360 aaKnown RBP13.71□□□□□ -0.21
SEC13-204ENST00000397099 ZPBPQ9BS86 351 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 SEMA6CQ9H3T2 930 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 LZTFL1Q9NQ48 299 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 PRDM8Q9NQV8 689 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 PISDQ9UG56 409 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 SLC23A2Q9UGH3 650 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 TMPRSS11EQ9UL52 423 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 R3HDM2Q9Y2K5 976 aaKnown RBP13.71□□□□□ -0.21
SEC13-204ENST00000397099 SSUH2Q9Y2M2 353 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 PCDHB11Q9Y5F2 797 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 PCDHGA3Q9Y5H0 932 aa13.71□□□□□ -0.21
SEC13-204ENST00000397099 TRBV23OR9-2A0A075B6M9 112 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 MGAT4DA6NG13 374 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.7□□□□□ -0.22
SEC13-204ENST00000397099 E7EVH7 732 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 F8W8V4 182 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 QSOX1O00391 747 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 GAPDHSO14556 408 aaPredicted RBP13.7□□□□□ -0.22
SEC13-204ENST00000397099 UGT1A9O60656 530 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 MTX2O75431 263 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 POP7O75817 140 aaKnown RBP13.7□□□□□ -0.22
SEC13-204ENST00000397099 PRB1P04280 392 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 UGT1A6P19224 532 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 UGT1A1P22309 533 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 UGT1A4P22310 534 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 SLC5A2P31639 672 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 UGT1A3P35503 534 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 CDH17Q12864 832 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 MSLNQ13421 630 aaPredicted RBP13.7□□□□□ -0.22
SEC13-204ENST00000397099 BCL7AQ4VC05 210 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 TAF1BQ53T94 588 aaPredicted RBP13.7□□□□□ -0.22
SEC13-204ENST00000397099 ZNF648Q5T619 568 aaPredicted RBP13.7□□□□□ -0.22
SEC13-204ENST00000397099 CYB5D1Q6P9G0 228 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 ZNF449Q6P9G9 518 aa13.7□□□□□ -0.22
SEC13-204ENST00000397099 TMEM220Q6QAJ8 160 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms