RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 GPIP06744 558 aa15.73■□□□□ 0.11
ATP2A3-206ENST00000397043 HOXB8P17481 243 aaPredicted RBP15.73■□□□□ 0.11
ATP2A3-206ENST00000397043 RFC2P35250 354 aa15.73■□□□□ 0.11
ATP2A3-206ENST00000397043 GDF5P43026 501 aa15.73■□□□□ 0.11
ATP2A3-206ENST00000397043 ALDH3B2P48448 385 aa15.73■□□□□ 0.11
ATP2A3-206ENST00000397043 HK3P52790 923 aa15.73■□□□□ 0.11
ATP2A3-206ENST00000397043 IL1RL1Q01638 556 aa15.73■□□□□ 0.11
ATP2A3-206ENST00000397043 RCAN2Q14206 197 aa15.73■□□□□ 0.11
ATP2A3-206ENST00000397043 PYCR3Q53H96 274 aa15.73■□□□□ 0.11
ATP2A3-206ENST00000397043 TBPL2Q6SJ96 375 aa15.73■□□□□ 0.11
ATP2A3-206ENST00000397043 NCLNQ969V3 563 aa15.73■□□□□ 0.11
ATP2A3-206ENST00000397043 FUBP3Q96I24 572 aaKnown RBP eCLIP15.73■□□□□ 0.11
ATP2A3-206ENST00000397043 OLA1Q9NTK5 396 aaKnown RBP15.73■□□□□ 0.11
ATP2A3-206ENST00000397043 FNIP2Q9P278 1114 aa15.73■□□□□ 0.11
ATP2A3-206ENST00000397043 IGLV3-10A0A075B6K4 115 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 SNAP91O60641 907 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 GJB5O95377 273 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 PENKP01210 267 aaPredicted RBP15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 CCND3P30281 292 aaPredicted RBP15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 SEMG2Q02383 582 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 ZNF177Q13360 481 aaPredicted RBP15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 LAPTM5Q13571 262 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 SELPLGQ14242 412 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 SETMARQ53H47 684 aaPredicted RBP15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 PTRHD1Q6GMV3 140 aaKnown RBP15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 LETMD1Q6P1Q0 360 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 PRSS55Q6UWB4 352 aaPredicted RBP15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 C17orf99Q6UX52 265 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 XKR5Q6UX68 686 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 SLC24A5Q71RS6 500 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 MILR1Q7Z6M3 343 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 ZNF598Q86UK7 904 aaKnown RBP15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 ITFG1Q8TB96 612 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 ABCG8Q9H221 673 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 PFDN4Q9NQP4 134 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 INTS10Q9NVR2 710 aaKnown RBP15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 NLE1Q9NVX2 485 aaPredicted RBP15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 KANSL1LA0AUZ9 987 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 VPS4BO75351 444 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 MATN4O95460 622 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 FCGR1AP12314 374 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 HSPA7P48741 367 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 SLC11A2P49281 568 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 ERVPABLB-1P60509 514 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 ERVK-8P63133 956 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 RPL38P63173 70 aaKnown RBP15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 TGFBIQ15582 683 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 AP5B1Q2VPB7 878 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 INTS11Q5TA45 600 aaKnown RBP15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 BORAQ6PGQ7 559 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 SPATA19Q7Z5L4 167 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 TMEM199Q8N511 208 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 CLDN19Q8N6F1 224 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 OR10Q1Q8NGQ4 319 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 BDH2Q9BUT1 245 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 LTB4R2Q9NPC1 389 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 WARS2Q9UGM6 360 aaKnown RBP15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 AFF4Q9UHB7 1163 aaKnown RBP15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 ZNF711Q9Y462 761 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 SLC30A1Q9Y6M5 507 aa15.72■□□□□ 0.11
ATP2A3-206ENST00000397043 TDRD15B5MCY1 1934 aaKnown RBP15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 S100BP04271 92 aaPredicted RBP15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 VARSP26640 1264 aaKnown RBP15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 HOXD9P28356 352 aaPredicted RBP15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 CAPGP40121 348 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 PTGR1Q14914 329 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 ATP6AP1Q15904 470 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 CST9Q5W186 159 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 FAM151BQ6UXP7 276 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 RSPO2Q6UXX9 243 aaPredicted RBP15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 GALNT7Q86SF2 657 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 GPR150Q8NGU9 434 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 PROKR1Q8TCW9 393 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 SKA2Q8WVK7 121 aaPredicted RBP15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 MUS81Q96NY9 551 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 U3KQV3 271 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 RASAL1O95294 804 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 MYF6P23409 242 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 ATP5C1P36542 298 aaKnown RBP15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 MAPKAPK2P49137 400 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 SGSHP51688 502 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 ZNF140P52738 457 aaPredicted RBP15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 TUBA4AP68366 448 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 SLC36A3Q495N2 470 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 RNF219Q5W0B1 726 aaPredicted RBP15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 KLHL35Q6PF15 583 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 COLGALT2Q8IYK4 626 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 TBC1D21Q8IYX1 336 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 LRRC43Q8N309 656 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 BIRC8Q96P09 236 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 HACD3Q9P035 362 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 LIMD1Q9UGP4 676 aa15.71■□□□□ 0.11
ATP2A3-206ENST00000397043 MTMR11A4FU01 709 aa15.71■□□□□ 0.1
ATP2A3-206ENST00000397043 NOBOXO60393 691 aa15.71■□□□□ 0.1
ATP2A3-206ENST00000397043 ACSL4O60488 711 aa15.71■□□□□ 0.1
ATP2A3-206ENST00000397043 ATE1O95260 518 aa15.71■□□□□ 0.1
ATP2A3-206ENST00000397043 EPOP01588 193 aa15.71■□□□□ 0.1
ATP2A3-206ENST00000397043 RPS17P08708 135 aaKnown RBP15.71■□□□□ 0.1
ATP2A3-206ENST00000397043 ALPIP09923 528 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms