RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 ACADVLP49748 655 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 THOP1P52888 689 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 IRX1P78414 480 aaPredicted RBP14.77□□□□□ -0.05
CBX3-202ENST00000396386 KIF19Q2TAC6 998 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 PIGGQ5H8A4 983 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 ZDHHC20Q5W0Z9 365 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 SBSNQ6UWP8 590 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 GPRIN3Q6ZVF9 776 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 ADGRG6Q86SQ4 1221 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 SYVN1Q86TM6 617 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 AHI1Q8N157 1196 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 ZBTB2Q8N680 514 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 PBXIP1Q96AQ6 731 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 NAF1Q96HR8 494 aaKnown RBP14.77□□□□□ -0.05
CBX3-202ENST00000396386 PLEKHG4BQ96PX9 1271 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 ZNF382Q96SR6 550 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 CDRT15Q96T59 188 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 SLC2A11Q9BYW1 496 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 TUBB1Q9H4B7 451 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 FBRSL1Q9HCM7 1045 aaKnown RBP14.77□□□□□ -0.05
CBX3-202ENST00000396386 CCDC167Q9P0B6 97 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 MARK1Q9P0L2 795 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 POLG2Q9UHN1 485 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 TNPO3Q9Y5L0 923 aaKnown RBP14.77□□□□□ -0.05
CBX3-202ENST00000396386 WNT6Q9Y6F9 365 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 PLXNA2O75051 1894 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 A0A1B0GTL3 188 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 AGAP14A8MT82 685 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 WASH3PC4AMC7 463 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 C5orf67F2Z3F1 127 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 E2F3O00716 465 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 ZNF197O14709 1029 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 SLC9A3R1O14745 358 aaPredicted RBP14.76□□□□□ -0.05
CBX3-202ENST00000396386 CFLARO15519 480 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 MAP3K7O43318 606 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 SLC25A14O95258 325 aaPredicted RBP14.76□□□□□ -0.05
CBX3-202ENST00000396386 TRIM16O95361 564 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 UROSP10746 265 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 ACADSP16219 412 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 CEBPBP17676 345 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 LBPP18428 481 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 POLR2EP19388 210 aaKnown RBP14.76□□□□□ -0.05
CBX3-202ENST00000396386 ATP6V1C1P21283 382 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 PKNOX1P55347 436 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 SEMG2Q02383 582 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 ZNF423Q2M1K9 1284 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 TTLL9Q3SXZ7 439 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 GDPD4Q6W3E5 623 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 GRASPQ7Z6J2 395 aaPredicted RBP14.76□□□□□ -0.05
CBX3-202ENST00000396386 UBE2Q1Q7Z7E8 422 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 ADIPOR2Q86V24 386 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 PHYKPLQ8IUZ5 450 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 CLDN19Q8N6F1 224 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 CHST14Q8NCH0 376 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 PDPRQ8NCN5 879 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 PYDC1Q8WXC3 89 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 ULK4Q96C45 1275 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 TUBGCP3Q96CW5 907 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 FAM126AQ9BYI3 521 aaPredicted RBP14.76□□□□□ -0.05
CBX3-202ENST00000396386 MTIF3Q9H2K0 278 aaKnown RBP14.76□□□□□ -0.05
CBX3-202ENST00000396386 LINC00597Q9H2U6 94 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 PFDN4Q9NQP4 134 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 ZDHHC7Q9NXF8 308 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 CACNA2D2Q9NY47 1150 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 ZDHHC3Q9NYG2 299 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 BCAP29Q9UHQ4 241 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 SLCO3A1Q9UIG8 710 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 ERVW-1Q9UQF0 538 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 MRASO14807 208 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 BAG2O95816 211 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 POU2F2P09086 479 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 C1SP09871 688 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 LINC00032P0C843 101 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 GPX3P22352 226 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 NSG1P42857 185 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 PCBP2Q15366 365 aaKnown RBP eCLIP14.76□□□□□ -0.05
CBX3-202ENST00000396386 CRY1Q16526 586 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 KIAA0907Q7Z7F0 614 aaPredicted RBP14.76□□□□□ -0.05
CBX3-202ENST00000396386 PLPP6Q8IY26 295 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 C7orf61Q8IZ16 206 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 ING5Q8WYH8 240 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 BRD9Q9H8M2 597 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 B4GALT6Q9UBX8 382 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 OARD1Q9Y530 152 aa14.76□□□□□ -0.05
CBX3-202ENST00000396386 BBIP1A8MTZ0 92 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 FBP2O00757 339 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 FFAR2O15552 330 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 ME2P23368 584 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 DPP6P42658 865 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 PSME3P61289 254 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 POLR2LP62875 67 aaKnown RBP14.75□□□□□ -0.05
CBX3-202ENST00000396386 GRB7Q14451 532 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 ZNF697Q5TEC3 545 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 BRAT1Q6PJG6 821 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 SPRED2Q7Z698 418 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 DHDDSQ86SQ9 333 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 MIER2Q8N344 545 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 HIPK4Q8NE63 616 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 OR2A12Q8NGT7 310 aa14.75□□□□□ -0.05
CBX3-202ENST00000396386 NAT14Q8WUY8 206 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms