RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ELOVL2Q9NXB9 296 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 A0A0J9YYE9 177 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ADH1BP00325 375 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 TRBC1P01850 177 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 WEE1P30291 646 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 SLC1A2P43004 574 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 LRP8Q14114 963 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 TRIM25Q14258 630 aaKnown RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 CARD16Q5EG05 197 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 FNBP1LQ5T0N5 605 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 DLK2Q6UY11 383 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 DHFR2Q86XF0 187 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 PROSER1Q86XN7 944 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 NRSN1Q8IZ57 195 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 SLC32A1Q9H598 525 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 MOSPD1Q9UJG1 213 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 RUVBL1Q9Y265 456 aaKnown RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ZFHX2Q9C0A1 2572 aaPredicted RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 UPK3BL1B0FP48 263 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 UPK3BL2E5RIL1 263 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 PHGDHO43175 533 aaKnown RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 SERPINB7O75635 380 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 AHSGP02765 367 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 RPS3P23396 243 aaKnown RBP eCLIP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 TRAP1Q12931 704 aaKnown RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 NFATC2Q13469 925 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 NFYCQ13952 458 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ZNF805Q5CZA5 627 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 TRMT10BQ6PF06 316 aaKnown RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 CUZD1Q86UP6 607 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 CYP4Z1Q86W10 505 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 PEX5LQ8IYB4 626 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 SCLYQ96I15 445 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 RNF145Q96MT1 663 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 AGAP2Q99490 1192 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 GPR62Q9BZJ7 368 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 INVSQ9Y283 1065 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 VWA8A3KMH1 1905 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 MATN2O00339 956 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 OAS1P00973 400 aaKnown RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 EBLN1P0CF75 366 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ATAD3BQ5T9A4 648 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 SH3PXD2AQ5TCZ1 1133 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ULK2Q8IYT8 1036 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 EID3Q8N140 333 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 PNPT1Q8TCS8 783 aaKnown RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 GLMNQ92990 594 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 SGF29Q96ES7 293 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 SLC40A1Q9NP59 571 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ARHGEF3Q9NR81 526 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 NLE1Q9NVX2 485 aaPredicted RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 PCDHGC4Q9Y5F7 938 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 DOCK10Q96BY6 2186 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 F5H423 210 aaPredicted RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 FMO4P31512 558 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 S100A3P33764 101 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 SRSF11Q05519 484 aaKnown RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 OVGP1Q12889 678 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 GK3PQ14409 553 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 CYP51A1Q16850 503 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 PLPP4Q5VZY2 271 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 NEK10Q6ZWH5 1172 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 BBS7Q8IWZ6 715 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 SPATA22Q8NHS9 363 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 CLEC4CQ8WTT0 213 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 GATA5Q9BWX5 397 aaPredicted RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 PITHD1Q9GZP4 211 aaPredicted RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 SCN3BQ9NY72 215 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 AKAP7Q9P0M2 348 aaPredicted RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 GULP1Q9UBP9 304 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 NOTCH2Q04721 2471 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 SLC16A5O15375 505 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 SIN3BO75182 1162 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 FKBP9O95302 570 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ARL4DP49703 201 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 WNT7BP56706 349 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 OLR1P78380 273 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 MRPL58Q14197 206 aaKnown RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ARHGAP19Q14CB8 494 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 TGFBIQ15582 683 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ANKRD22Q5VYY1 191 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 FAM91A1Q658Y4 838 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 CMC1Q7Z7K0 106 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 BTBD9Q96Q07 612 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 LYSMD1Q96S90 227 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 LRRC3Q9BY71 257 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 NMUR1Q9HB89 426 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ZSCAN32Q9NX65 697 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ZMYND8Q9ULU4 1186 aaPredicted RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ENTPD4Q9Y227 616 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 A0A1W2PP18 115 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 PDZK1P1A8MUH7 402 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 TNFRSF10BO14763 440 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ALDOAP04075 364 aaKnown RBP3.35□□□□□ -1.87
VPS13C-203ENST00000395896 DSC2Q02487 901 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 TIMM50Q3ZCQ8 353 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 LHX8Q68G74 356 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 NEK5Q6P3R8 708 aa3.35□□□□□ -1.87
VPS13C-203ENST00000395896 ADCK2Q7Z695 626 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms