RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 EPN3Q9H201 632 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 TMPRSS11EQ9UL52 423 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 DHRS7Q9Y394 339 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 CCDC163A0A0D9SF12 145 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 LATO43561 262 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 HOXC4P09017 264 aaPredicted RBP13.5□□□□□ -0.25
VAPB-202ENST00000395802 CBSLP0DN79 551 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 KELP23276 732 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 MAT2AP31153 395 aaKnown RBP13.5□□□□□ -0.25
VAPB-202ENST00000395802 HOXA6P31267 233 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 CBSP35520 551 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 CLCN7P51798 805 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 SEC24CP53992 1094 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 WDR4P57081 412 aaKnown RBP13.5□□□□□ -0.25
VAPB-202ENST00000395802 PLOD1Q02809 727 aaPredicted RBP13.5□□□□□ -0.25
VAPB-202ENST00000395802 INPP5AQ14642 412 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 IRF4Q15306 451 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 USP39Q53GS9 565 aaKnown RBP13.5□□□□□ -0.25
VAPB-202ENST00000395802 KIAA0895LQ68EN5 471 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 SLC36A4Q6YBV0 504 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 TAX1BP1Q86VP1 789 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 HEATR4Q86WZ0 1026 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 PNPLA1Q8N8W4 532 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 CADM4Q8NFZ8 388 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 COX14Q96I36 57 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 RMI1Q9H9A7 625 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 MLXIPLQ9NP71 852 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 CNOT6Q9ULM6 557 aaKnown RBP13.5□□□□□ -0.25
VAPB-202ENST00000395802 RUVBL2Q9Y230 463 aaKnown RBP13.5□□□□□ -0.25
VAPB-202ENST00000395802 HS3ST3A1Q9Y663 406 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 PRAMEF26H0Y7S4 382 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 K7ESM1 405 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 SLC31A1O15431 190 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 NIPSNAP2O75323 286 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 ASMTLO95671 621 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 MYCLP1P12525 358 aaPredicted RBP13.5□□□□□ -0.25
VAPB-202ENST00000395802 ENO3P13929 434 aaPredicted RBP13.5□□□□□ -0.25
VAPB-202ENST00000395802 HTR1BP28222 390 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 MAPK9P45984 424 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 PPP2CBP62714 309 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 PPP2CAP67775 309 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 B4GALNT1Q00973 533 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 CSHL1Q14406 222 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 N4BP2L1Q5TBK1 243 aaPredicted RBP13.5□□□□□ -0.25
VAPB-202ENST00000395802 LVRNQ6Q4G3 990 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 TRIM42Q8IWZ5 723 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 RDH11Q8TC12 318 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 CD200R1Q8TD46 325 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 ASZ1Q8WWH4 475 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 SGF29Q96ES7 293 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 PDLIM5Q96HC4 596 aaKnown RBP13.5□□□□□ -0.25
VAPB-202ENST00000395802 FAM111AQ96PZ2 611 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 PAIP2Q9BPZ3 127 aaKnown RBP13.5□□□□□ -0.25
VAPB-202ENST00000395802 MRPL57Q9BQC6 102 aaKnown RBP13.5□□□□□ -0.25
VAPB-202ENST00000395802 DERL2Q9GZP9 239 aa13.5□□□□□ -0.25
VAPB-202ENST00000395802 SARS2Q9NP81 518 aaKnown RBP13.5□□□□□ -0.25
VAPB-202ENST00000395802 SPATA6Q9NWH7 488 aaPredicted RBP13.5□□□□□ -0.25
VAPB-202ENST00000395802 DNMT3AQ9Y6K1 912 aaPredicted RBP13.5□□□□□ -0.25
VAPB-202ENST00000395802 LRRK1Q38SD2 2015 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 AXIN1O15169 862 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 MTX2O75431 263 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 CA5AP35218 305 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 PRLHRP49683 370 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 YPEL5P62699 121 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 FGL2Q14314 439 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 ZNF460Q14592 562 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 BCL7AQ4VC05 210 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 PAQR3Q6TCH7 311 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 MICALCLQ6ZW33 695 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 ZBTB2Q8N680 514 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 PLA2G15Q8NCC3 412 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 SCYL1Q96KG9 808 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 NECAB3Q96P71 396 aaPredicted RBP13.49□□□□□ -0.25
VAPB-202ENST00000395802 ZNF317Q96PQ6 595 aaPredicted RBP13.49□□□□□ -0.25
VAPB-202ENST00000395802 CCM2Q9BSQ5 444 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 GPR174Q9BXC1 333 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 TPSD1Q9BZJ3 242 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 OR2AG1Q9H205 316 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 MRPL46Q9H2W6 279 aaKnown RBP13.49□□□□□ -0.25
VAPB-202ENST00000395802 C2orf42Q9NWW7 574 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 MED16Q9Y2X0 877 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 PRSS21Q9Y6M0 314 aa13.49□□□□□ -0.25
VAPB-202ENST00000395802 IGHV1OR15-9A0A0B4J2B8 117 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 C17orf113A0A1B0GUU1 675 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 GMNCA6NCL1 334 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 BIRC5O15392 142 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 WISP3O95389 354 aaPredicted RBP13.48□□□□□ -0.25
VAPB-202ENST00000395802 NEFHP12036 1026 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 PLEKHS1Q5SXH7 462 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 CWF19L1Q69YN2 538 aaKnown RBP13.48□□□□□ -0.25
VAPB-202ENST00000395802 TMEM220Q6QAJ8 160 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 CDHR3Q6ZTQ4 885 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 DET1Q7L5Y6 550 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 ADGRG6Q86SQ4 1221 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 PIM3Q86V86 326 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 C11orf74Q86VG3 221 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 TRAPPC5Q8IUR0 188 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 CENPLQ8N0S6 344 aaPredicted RBP13.48□□□□□ -0.25
VAPB-202ENST00000395802 MYO1HQ8N1T3 1032 aa13.48□□□□□ -0.25
VAPB-202ENST00000395802 RASGEF1AQ8N9B8 481 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms