RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 SPAM1P38567 509 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 DRG2P55039 364 aaKnown RBP15.9■□□□□ 0.14
CXCL12-206ENST00000395795 CYP4F2P78329 520 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 XIAPP98170 497 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 DMPKQ09013 629 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 INSCQ1MX18 579 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 SNAP47Q5SQN1 464 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 GPRC6AQ5T6X5 926 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 CCDC70Q6NSX1 233 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 FAM151BQ6UXP7 276 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 TIPARPQ7Z3E1 657 aaKnown RBP15.9■□□□□ 0.14
CXCL12-206ENST00000395795 BLOC1S5Q8TDH9 187 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 NAT14Q8WUY8 206 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 OSGEPL1Q9H4B0 414 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 SLC40A1Q9NP59 571 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 SMOXQ9NWM0 555 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 HACD3Q9P035 362 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 AKAP7Q9P0M2 348 aaPredicted RBP15.9■□□□□ 0.14
CXCL12-206ENST00000395795 TRIM10Q9UDY6 481 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 RSPH14Q9UHP6 348 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 ARL5AQ9Y689 179 aa15.9■□□□□ 0.14
CXCL12-206ENST00000395795 GCN1Q92616 2671 aaKnown RBP15.9■□□□□ 0.14
CXCL12-206ENST00000395795 AGAP14A8MT82 685 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 STMND1H3BQB6 276 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 SLC2A4P14672 509 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 ITGB6P18564 788 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 RPL10P27635 214 aaKnown RBP15.89■□□□□ 0.13
CXCL12-206ENST00000395795 PSMB4P28070 264 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 LEPRP48357 1165 aaKnown RBP15.89■□□□□ 0.13
CXCL12-206ENST00000395795 VAV2P52735 878 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 SEPT7Q16181 437 aaKnown RBP15.89■□□□□ 0.13
CXCL12-206ENST00000395795 ANKRD20A2Q5SQ80 823 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 MANEAQ5SRI9 462 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 ANKRD20A1Q5TYW2 823 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 TMEM164Q5U3C3 297 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 ANKRD20A3Q5VUR7 823 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 GLT6D1Q7Z4J2 308 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 RSC1A1Q92681 617 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 EXTL1Q92935 676 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 MED8Q96G25 268 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 AHCYL2Q96HN2 611 aaKnown RBP15.89■□□□□ 0.13
CXCL12-206ENST00000395795 CTRCQ99895 268 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 APOL2Q9BQE5 337 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 FICDQ9BVA6 458 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.89■□□□□ 0.13
CXCL12-206ENST00000395795 FBXO8Q9NRD0 319 aa15.89■□□□□ 0.13
CXCL12-206ENST00000395795 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.89■□□□□ 0.13
CXCL12-206ENST00000395795 GLYATL1P3A0A0U1RQE8 302 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 CCDC66A2RUB6 948 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 H7C0C1 242 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 DDX3YO15523 660 aaKnown RBP15.88■□□□□ 0.13
CXCL12-206ENST00000395795 POP7O75817 140 aaKnown RBP15.88■□□□□ 0.13
CXCL12-206ENST00000395795 DLGAP3O95886 979 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 RBP3P10745 1247 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 LIFP15018 202 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 MAPK9P45984 424 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 ATP5OP48047 213 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 KLF1Q13351 362 aaPredicted RBP15.88■□□□□ 0.13
CXCL12-206ENST00000395795 GPR18Q14330 331 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 KCTD11Q693B1 232 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 FAM129CQ86XR2 697 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 GPR150Q8NGU9 434 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 CCDC110Q8TBZ0 833 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 C9orf72Q96LT7 481 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 EPB41L1Q9H4G0 881 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 POT1Q9NUX5 634 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 SEMA5BQ9P283 1151 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 KLHL3Q9UH77 587 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 TMEM184BQ9Y519 407 aaPredicted RBP15.88■□□□□ 0.13
CXCL12-206ENST00000395795 PIEZO2Q9H5I5 2752 aa15.88■□□□□ 0.13
CXCL12-206ENST00000395795 PDZK1P1A8MUH7 402 aa15.87■□□□□ 0.13
CXCL12-206ENST00000395795 KIF1CO43896 1103 aaKnown RBP15.87■□□□□ 0.13
CXCL12-206ENST00000395795 UBXN7O94888 489 aa15.87■□□□□ 0.13
CXCL12-206ENST00000395795 ITGB2P05107 769 aa15.87■□□□□ 0.13
CXCL12-206ENST00000395795 TYRP1P17643 537 aa15.87■□□□□ 0.13
CXCL12-206ENST00000395795 GEMP55040 296 aa15.87■□□□□ 0.13
CXCL12-206ENST00000395795 RWDD2BP57060 319 aa15.87■□□□□ 0.13
CXCL12-206ENST00000395795 EIF3EP60228 445 aaKnown RBP15.87■□□□□ 0.13
CXCL12-206ENST00000395795 PPP1CAP62136 330 aa15.87■□□□□ 0.13
CXCL12-206ENST00000395795 TAF1AQ15573 450 aaPredicted RBP15.87■□□□□ 0.13
CXCL12-206ENST00000395795 TBR1Q16650 682 aa15.87■□□□□ 0.13
CXCL12-206ENST00000395795 DCAF12Q5T6F0 453 aa15.87■□□□□ 0.13
CXCL12-206ENST00000395795 ZDHHC20Q5W0Z9 365 aa15.87■□□□□ 0.13
CXCL12-206ENST00000395795 TRAPPC5Q8IUR0 188 aa15.87■□□□□ 0.13
CXCL12-206ENST00000395795 AVL9Q8NBF6 648 aa15.87■□□□□ 0.13
CXCL12-206ENST00000395795 BRSK1Q8TDC3 778 aa15.87■□□□□ 0.13
CXCL12-206ENST00000395795 CALR3Q96L12 384 aaKnown RBP15.87■□□□□ 0.13
CXCL12-206ENST00000395795 SPATA13Q96N96 652 aa15.87■□□□□ 0.13
CXCL12-206ENST00000395795 ASPSCR1Q9BZE9 553 aa15.87■□□□□ 0.13
CXCL12-206ENST00000395795 STN1Q9H668 368 aaKnown RBP15.87■□□□□ 0.13
CXCL12-206ENST00000395795 ARNT2Q9HBZ2 717 aa15.87■□□□□ 0.13
CXCL12-206ENST00000395795 TCRBV7S2A1N4TA0A589 114 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 OR2AG2A6NM03 316 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 KCNN4O15554 427 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 RAD1O60671 282 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 PPFIA2O75334 1257 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 ANXA9O76027 345 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 VIPP01282 170 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 IDSP22304 550 aa15.86■□□□□ 0.13
CXCL12-206ENST00000395795 ZNF140P52738 457 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms