RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 SNAP47Q5SQN1 464 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 GPRC6AQ5T6X5 926 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 ANKRD20A1Q5TYW2 823 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 ANKRD20A3Q5VUR7 823 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 KCTD11Q693B1 232 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 ABRAXAS1Q6UWZ7 409 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 BZW1Q7L1Q6 419 aaKnown RBP8.71□□□□□ -1.02
ATG4A-205ENST00000394892 TIPARPQ7Z3E1 657 aaKnown RBP8.71□□□□□ -1.02
ATG4A-205ENST00000394892 LRRTM4Q86VH4 590 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 PHYKPLQ8IUZ5 450 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 LILRA3Q8N6C8 439 aaPredicted RBP8.71□□□□□ -1.02
ATG4A-205ENST00000394892 DTX3LQ8TDB6 740 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 BLOC1S5Q8TDH9 187 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 NCSTNQ92542 709 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 NKD1Q969G9 470 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 TMEM159Q96B96 161 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 SGF29Q96ES7 293 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 VAT1Q99536 393 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 SLC38A3Q99624 504 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 NRTNQ99748 197 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 TIMM29Q9BSF4 260 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 TRABDQ9H4I3 376 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 SIDT1Q9NXL6 827 aaKnown RBP8.71□□□□□ -1.02
ATG4A-205ENST00000394892 RSPH14Q9UHP6 348 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 TRHDEQ9UKU6 1024 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 CAPN6Q9Y6Q1 641 aa8.71□□□□□ -1.02
ATG4A-205ENST00000394892 KIR2DS5A0A0G2JLQ3 304 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 A0A0G2JNG1 304 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 CCDC66A2RUB6 948 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 LILRA5A6NI73 299 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 EFCAB7A8K855 629 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 AGAP14A8MT82 685 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 B4E171 279 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 KIR2DS3K7RE56 304 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 KMOO15229 486 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 KCNN4O15554 427 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 KIF1CO43896 1103 aaKnown RBP8.7□□□□□ -1.02
ATG4A-205ENST00000394892 VEGFDO43915 354 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 POP7O75817 140 aaKnown RBP8.7□□□□□ -1.02
ATG4A-205ENST00000394892 C9P02748 559 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 TYRP1P17643 537 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 HLA-DPA1P20036 260 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 SPAM1P38567 509 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 TSPAN7P41732 249 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 LEPRP48357 1165 aaKnown RBP8.7□□□□□ -1.02
ATG4A-205ENST00000394892 CDKN1CP49918 316 aaPredicted RBP8.7□□□□□ -1.02
ATG4A-205ENST00000394892 ZNF140P52738 457 aaPredicted RBP8.7□□□□□ -1.02
ATG4A-205ENST00000394892 RWDD2BP57060 319 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 KIR2DS5Q14953 304 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 KCTD19Q17RG1 926 aaPredicted RBP8.7□□□□□ -1.02
ATG4A-205ENST00000394892 ZNF658BQ4V348 819 aaPredicted RBP8.7□□□□□ -1.02
ATG4A-205ENST00000394892 ODF2Q5BJF6 829 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 AGAP9Q5VTM2 703 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 ANKS6Q68DC2 871 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 TMEM220Q6QAJ8 160 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 WDR74Q6RFH5 385 aaPredicted RBP8.7□□□□□ -1.02
ATG4A-205ENST00000394892 WASH2PQ6VEQ5 465 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 TMEM26Q6ZUK4 368 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 BEND7Q8N7W2 519 aaPredicted RBP8.7□□□□□ -1.02
ATG4A-205ENST00000394892 SPC24Q8NBT2 197 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 AGBL5Q8NDL9 886 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 DDHD1Q8NEL9 900 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 OR13C4Q8NGS5 318 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 GPR150Q8NGU9 434 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 SLC35B2Q8TB61 432 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 RSC1A1Q92681 617 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 RTP4Q96DX8 246 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 SPATA13Q96N96 652 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 TAAR9Q96RI9 348 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 CTRCQ99895 268 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 BAG1Q99933 345 aaPredicted RBP8.7□□□□□ -1.02
ATG4A-205ENST00000394892 B3GNT4Q9C0J1 378 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 OSGEPL1Q9H4B0 414 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 UCK1Q9HA47 277 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 SLC40A1Q9NP59 571 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 WASH6PQ9NQA3 447 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 RAD18Q9NS91 495 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 FKBPLQ9UIM3 349 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 PCDHGA4Q9Y5G9 962 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 UNC13CQ8NB66 2214 aa8.7□□□□□ -1.02
ATG4A-205ENST00000394892 GLYATL1P3A0A0U1RQE8 302 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 MACROD2A1Z1Q3 448 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 C5orf60A6NFR6 353 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 OR2AG2A6NM03 316 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 GPR89AB7ZAQ6 455 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 LDB2O43679 373 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 NTRK1P04629 796 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 GPR89BP0CG08 455 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 MAPK9P45984 424 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 EPHA4P54764 986 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 GEMP55040 296 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 SH3BP2P78314 561 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 MC2RQ01718 297 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 DMPKQ09013 629 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 GPR18Q14330 331 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 NFE2L1Q14494 772 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 RPE65Q16518 533 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 INSCQ1MX18 579 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 MANEAQ5SRI9 462 aa8.69□□□□□ -1.02
ATG4A-205ENST00000394892 CCDC70Q6NSX1 233 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms