RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 POLR3HQ9Y535 204 aaPredicted RBP10.44□□□□□ -0.74
CALD1-203ENST00000393118 HEMK1Q9Y5R4 338 aaPredicted RBP10.44□□□□□ -0.74
CALD1-203ENST00000393118 KIAA0100Q14667 2235 aaKnown RBP10.44□□□□□ -0.74
CALD1-203ENST00000393118 M0R3G1 203 aa10.44□□□□□ -0.74
CALD1-203ENST00000393118 SLC25A14O95258 325 aaPredicted RBP10.44□□□□□ -0.74
CALD1-203ENST00000393118 UGT1A6P19224 532 aa10.44□□□□□ -0.74
CALD1-203ENST00000393118 UGT1A1P22309 533 aa10.44□□□□□ -0.74
CALD1-203ENST00000393118 UGT1A4P22310 534 aa10.44□□□□□ -0.74
CALD1-203ENST00000393118 UGT1A3P35503 534 aa10.44□□□□□ -0.74
CALD1-203ENST00000393118 UGT1A5P35504 534 aa10.44□□□□□ -0.74
CALD1-203ENST00000393118 GGT5P36269 586 aa10.44□□□□□ -0.74
CALD1-203ENST00000393118 TPTEP56180 551 aa10.44□□□□□ -0.74
CALD1-203ENST00000393118 MS4A2Q01362 244 aa10.44□□□□□ -0.74
CALD1-203ENST00000393118 KLHDC9Q8NEP7 349 aa10.44□□□□□ -0.74
CALD1-203ENST00000393118 MTHFD1P11586 935 aaKnown RBP10.43□□□□□ -0.74
CALD1-203ENST00000393118 NR4A1P22736 598 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 ARHGDIAP52565 204 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 STC1P52823 247 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 DIO3P55073 304 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 MYLK3Q32MK0 819 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 ZNF678Q5SXM1 525 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 FAM91A1Q658Y4 838 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 SZRD1Q7Z422 152 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 STK40Q8N2I9 435 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 ZCCHC7Q8N3Z6 543 aaKnown RBP10.43□□□□□ -0.74
CALD1-203ENST00000393118 CPSF7Q8N684 471 aaKnown RBP10.43□□□□□ -0.74
CALD1-203ENST00000393118 AARSD1Q9BTE6 412 aaKnown RBP10.43□□□□□ -0.74
CALD1-203ENST00000393118 ZFYVE1Q9HBF4 777 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 LEF1Q9UJU2 399 aaPredicted RBP10.43□□□□□ -0.74
CALD1-203ENST00000393118 ANAPC2Q9UJX6 822 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 VPS4BO75351 444 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 ZNF682O95780 498 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 IGSF6O95976 241 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 ZNF37AP17032 561 aaPredicted RBP10.43□□□□□ -0.74
CALD1-203ENST00000393118 GKP32189 559 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 CD97P48960 835 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 CREB5Q02930 508 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 IKBKEQ14164 716 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 DENND5AQ6IQ26 1287 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 KDELC1Q6UW63 502 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 COLGALT2Q8IYK4 626 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 CBR4Q8N4T8 237 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 EEF1AKMT1Q8WVE0 214 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 TAMM41Q96BW9 452 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 MYO19Q96H55 970 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 HEPHQ9BQS7 1158 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 POLR1BQ9H9Y6 1135 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 CAB39Q9Y376 341 aaPredicted RBP10.43□□□□□ -0.74
CALD1-203ENST00000393118 SNX5Q9Y5X3 404 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 OAZ2O95190 189 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 GJA1P17302 382 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 MAGP20916 626 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 SERPINA4P29622 427 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 ARCN1P48444 511 aaKnown RBP10.43□□□□□ -0.74
CALD1-203ENST00000393118 PPP3CCP48454 512 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 XIAPP98170 497 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 PFKPQ01813 784 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 RELAQ04206 551 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 GRB7Q14451 532 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 AP5B1Q2VPB7 878 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 DEFB115Q30KQ5 88 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 CMPK2Q5EBM0 449 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 TXNDC8Q6A555 127 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 ADAMTSL2Q86TH1 951 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 OR2T34Q8NGX1 318 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 OR2T3Q8NH03 318 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 ITFG1Q8TB96 612 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 ZNF558Q96NG5 402 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 IGSF5Q9NSI5 407 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 TMEM39AQ9NV64 488 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 VPS51Q9UID3 782 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 CPQQ9Y646 472 aa10.43□□□□□ -0.74
CALD1-203ENST00000393118 ASNA1O43681 348 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 ULK1O75385 1050 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 OGNP20774 298 aaKnown RBP10.42□□□□□ -0.74
CALD1-203ENST00000393118 CDKN1CP49918 316 aaPredicted RBP10.42□□□□□ -0.74
CALD1-203ENST00000393118 CDH15P55291 814 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 CLEC14AQ86T13 490 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 ISCA2Q86U28 154 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 CENPOQ9BU64 300 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 IPPKQ9H8X2 491 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 MRPL17Q9NRX2 175 aaKnown RBP10.42□□□□□ -0.74
CALD1-203ENST00000393118 A0A1W2PQ45 241 aaPredicted RBP10.42□□□□□ -0.74
CALD1-203ENST00000393118 A0A1W2PQY0 241 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 ANKRD66B4E2M5 251 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 PSMD11O00231 422 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 CDK14O94921 469 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 LRATO95237 230 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 CPSF4O95639 269 aaKnown RBP10.42□□□□□ -0.74
CALD1-203ENST00000393118 DGKAP23743 735 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 TAF1AQ15573 450 aaPredicted RBP10.42□□□□□ -0.74
CALD1-203ENST00000393118 ADGRF1Q5T601 910 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 SLC2A7Q6PXP3 512 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 GCNT7Q6ZNI0 430 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 LYSMD3Q7Z3D4 306 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 DHRSXQ8N5I4 330 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 HJURPQ8NCD3 748 aaPredicted RBP10.42□□□□□ -0.74
CALD1-203ENST00000393118 OR13J1Q8NGT2 312 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 SELENOMQ8WWX9 145 aa10.42□□□□□ -0.74
CALD1-203ENST00000393118 PTERQ96BW5 349 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms