RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 RRM2BQ7LG56 351 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 SSX9Q7RTT3 188 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 SPAG16Q8N0X2 631 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 PARP16Q8N5Y8 322 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 FBXO30Q8TB52 745 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 CD101Q93033 1021 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 NKD2Q969F2 451 aaPredicted RBP7.56□□□□□ -1.2
VTI1A-201ENST00000393077 CRELD1Q96HD1 420 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 SYNDIG1Q9H7V2 258 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 ABCB9Q9NP78 766 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 NGRNQ9NPE2 291 aaKnown RBP7.56□□□□□ -1.2
VTI1A-201ENST00000393077 PRDM8Q9NQV8 689 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 FBXO8Q9NRD0 319 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 RASSF1Q9NS23 344 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 EXD2Q9NVH0 621 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 STRCP1A6NGW2 1772 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 ARFGEF2Q9Y6D5 1785 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 TRAV6A0A075B6T7 132 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 FABP12A6NFH5 140 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 YDJCA8MPS7 323 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 H3BM21 787 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 INPPL1O15357 1258 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 MSH4O15457 936 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 RFPL3O75679 317 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 DDNO94850 711 aaPredicted RBP7.56□□□□□ -1.2
VTI1A-201ENST00000393077 WDPCPO95876 746 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 IL6P05231 212 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 UMPSP11172 480 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 COL6A1P12109 1028 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 MTHFRP42898 656 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 KCNC1P48547 511 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 CLCNKBP51801 687 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 MYL6P60660 151 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 MVKQ03426 396 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 HSF2Q03933 536 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 CAMK1Q14012 370 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 RFTN1Q14699 578 aaPredicted RBP7.56□□□□□ -1.2
VTI1A-201ENST00000393077 ACOX1Q15067 660 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 ARL13AQ5H913 290 aaPredicted RBP7.56□□□□□ -1.2
VTI1A-201ENST00000393077 IL31Q6EBC2 164 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 C11orf96Q7Z7L8 435 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 AADATQ8N5Z0 425 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 GDPD1Q8N9F7 314 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 ANKRD52Q8NB46 1076 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 ATAD1Q8NBU5 361 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 BPIFB1Q8TDL5 484 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 OTUB1Q96FW1 271 aaPredicted RBP7.56□□□□□ -1.2
VTI1A-201ENST00000393077 GMCL1Q96IK5 515 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 LURAP1Q96LR2 239 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 SSX3Q99909 188 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 PELOQ9BRX2 385 aaKnown RBP7.56□□□□□ -1.2
VTI1A-201ENST00000393077 TRAF4Q9BUZ4 470 aaPredicted RBP7.56□□□□□ -1.2
VTI1A-201ENST00000393077 CCDC32Q9BV29 185 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 THUMPD3Q9BV44 507 aaKnown RBP7.56□□□□□ -1.2
VTI1A-201ENST00000393077 GATA5Q9BWX5 397 aaPredicted RBP7.56□□□□□ -1.2
VTI1A-201ENST00000393077 NUSAP1Q9BXS6 441 aaKnown RBP7.56□□□□□ -1.2
VTI1A-201ENST00000393077 ZBTB26Q9HCK0 441 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 FNIP2Q9P278 1114 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 VPS28Q9UK41 221 aa7.56□□□□□ -1.2
VTI1A-201ENST00000393077 NOBOXO60393 691 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 TMEM63AO94886 807 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 MAP2K4P45985 399 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 TEAD4Q15561 434 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 PPM1JQ5JR12 505 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 CDAN1Q8IWY9 1227 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 PLPP6Q8IY26 295 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 RBPMSQ93062 196 aaKnown RBP7.55□□□□□ -1.2
VTI1A-201ENST00000393077 TMEM80Q96HE8 168 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 RBM4BQ9BQ04 359 aaKnown RBP7.55□□□□□ -1.2
VTI1A-201ENST00000393077 RBM4Q9BWF3 364 aaKnown RBP7.55□□□□□ -1.2
VTI1A-201ENST00000393077 ACE2Q9BYF1 805 aaPredicted RBP7.55□□□□□ -1.2
VTI1A-201ENST00000393077 NRBP2Q9NSY0 501 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 HCN3Q9P1Z3 774 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 KLHL42Q9P2K6 505 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 M0R233 179 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 CHADO15335 359 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 GLAP06280 429 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 FGF3P11487 239 aaPredicted RBP7.55□□□□□ -1.2
VTI1A-201ENST00000393077 PVALBP20472 110 aaPredicted RBP7.55□□□□□ -1.2
VTI1A-201ENST00000393077 SFNP31947 248 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 MAGEA2P43356 314 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 PRMT2P55345 433 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 RGS1Q08116 209 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 ZNF470Q6ECI4 717 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 CMC1Q7Z7K0 106 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 TAGAPQ8N103 731 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 ARL6IP6Q8N6S5 226 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 CDYL2Q8N8U2 506 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 RBM14Q96PK6 669 aaKnown RBP7.55□□□□□ -1.2
VTI1A-201ENST00000393077 TAAR1Q96RJ0 339 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 XKR8Q9H6D3 395 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 GMPR2Q9P2T1 348 aaKnown RBP7.55□□□□□ -1.2
VTI1A-201ENST00000393077 CXorf49A8MYA2 514 aaPredicted RBP7.55□□□□□ -1.2
VTI1A-201ENST00000393077 C9IYK1 514 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 ADAMTS3O15072 1205 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 MPOP05164 745 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 FABP1P07148 127 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 PSAPP07602 524 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 SPNP16150 400 aa7.55□□□□□ -1.2
VTI1A-201ENST00000393077 JUNBP17275 347 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms