RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 ACOX2Q99424 681 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 SLC39A3Q9BRY0 314 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 CD300AQ9UGN4 299 aa25.29■■□□□ 1.64
SMARCD3-203ENST00000392811 ZBBXA8MT70 800 aa25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 C9JVG2 144 aa25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 GIPC1O14908 333 aa25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 OR4F21O95013 312 aa25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 MATN4O95460 622 aa25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 IDO1P14902 403 aa25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 CAPN3P20807 821 aa25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 SPAM1P38567 509 aa25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 DIO3P55073 304 aa25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 C18orf21Q32NC0 220 aaPredicted RBP25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 FUT11Q495W5 492 aa25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 SCIMPQ6UWF3 145 aa25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 PCYOX1LQ8NBM8 494 aa25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 OR52B6Q8NGF0 335 aa25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 MIEF2Q96C03 454 aa25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 MAP10Q9P2G4 905 aa25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 CRLS1Q9UJA2 301 aa25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 HELZP42694 1942 aaKnown RBP25.28■■□□□ 1.64
SMARCD3-203ENST00000392811 BNIP3LO60238 219 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 SLC25A14O95258 325 aaPredicted RBP25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 RPS6KA2Q15349 733 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 MYLK3Q32MK0 819 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 GRAMD1BQ3KR37 738 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 VPS26BQ4G0F5 336 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 GRAMD4Q6IC98 578 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 SPATA19Q7Z5L4 167 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 DCBLD1Q8N8Z6 715 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 RIN3Q8TB24 985 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 NR1H4Q96RI1 486 aaPredicted RBP25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 EPS15L1Q9UBC2 864 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 RIMS3Q9UJD0 308 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 HS3ST2Q9Y278 367 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 NDUFAF1Q9Y375 327 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 GPR45Q9Y5Y3 372 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 DOCK6Q96HP0 2047 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 TRIM16O95361 564 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 PFKLP17858 780 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 ADGRE1Q14246 886 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 LYPLAL1Q5VWZ2 237 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 ASTLQ6HA08 431 aaPredicted RBP25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 C22orf39Q6P5X5 142 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 CRTC1Q6UUV9 634 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 CBARPQ8N350 705 aaPredicted RBP25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 CDYL2Q8N8U2 506 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 CDK15Q96Q40 435 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 LYSMD1Q96S90 227 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 TCF25Q9BQ70 676 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 COPS7BQ9H9Q2 264 aaPredicted RBP25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 TLR9Q9NR96 1032 aa25.27■■□□□ 1.64
SMARCD3-203ENST00000392811 PRSS51A0A1B0GVH4 220 aa25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 GLUD1P00367 558 aa25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 GJA8P48165 433 aa25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 SLC7A2P52569 658 aa25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 ERVFC1P60507 584 aa25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 ERVPABLB-1P60509 514 aa25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 HTRA4P83105 476 aaPredicted RBP25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 PCBP2Q15366 365 aaKnown RBP eCLIP25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 SAMD4BQ5PRF9 694 aaKnown RBP25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 TMEM25Q86YD3 366 aa25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 LILRA2Q8N149 483 aa25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 GPR26Q8NDV2 337 aa25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 OR2T11Q8NH01 316 aa25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 TCEAL4Q96EI5 215 aa25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 LRCH3Q96II8 777 aa25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 SLC45A3Q96JT2 553 aa25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 LRGUKQ96M69 825 aa25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 NOL11Q9H8H0 719 aaKnown RBP25.26■■□□□ 1.63
SMARCD3-203ENST00000392811 DPPA5A6NC42 116 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 MAGEA13PA6NCF6 341 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 RGS4P49798 205 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 GPR33Q49SQ1 333 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 MYO1HQ8N1T3 1032 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 ISG20Q96AZ6 181 aaKnown RBP25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 GPATCH1Q9BRR8 931 aaKnown RBP25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 AIG1Q9NVV5 245 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 DLGAP2Q9P1A6 1054 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 DTNAQ9Y4J8 743 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 CXorf51AA0A1B0GTR3 108 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 HIDE1A8MVS5 230 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 ANGPT2O15123 496 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 FFAR2O15552 330 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 S100BP04271 92 aaPredicted RBP25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 UBTFL6P0CB48 400 aaPredicted RBP25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 CHRM1P11229 460 aaPredicted RBP25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 TRAP1Q12931 704 aaKnown RBP25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 LETMD1Q6P1Q0 360 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 BLOC1S3Q6QNY0 202 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 NXPE1Q8N323 547 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 CLP1Q92989 425 aaKnown RBP25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 ECHDC3Q96DC8 303 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 SCRN2Q96FV2 425 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 TUBGCP5Q96RT8 1024 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 EMILIN2Q9BXX0 1053 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 SUV39H2Q9H5I1 410 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 IL1RL2Q9HB29 575 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 IL23AQ9NPF7 189 aa25.25■■□□□ 1.63
SMARCD3-203ENST00000392811 SCOCQ9UIL1 159 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms