RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ATOH8Q96SQ7 321 aa12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 ZSCAN5AQ9BUG6 496 aa12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 HDAC8Q9BY41 377 aa12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 NCKIPSDQ9NZQ3 722 aa12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 FADS3Q9Y5Q0 445 aa12.04□□□□□ -0.48
SPTBN1-203ENST00000389980 IGLV3-16A0A075B6K0 115 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 NCF1BA6NI72 391 aaPredicted RBP12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 NCF1CA8MVU1 366 aaPredicted RBP12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 H0Y858 1186 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 IPO13O94829 963 aaKnown RBP12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 TGDSO95455 350 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 HSPA4LO95757 839 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 MTHFD2P13995 350 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 NCF1P14598 390 aaPredicted RBP12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 CD9P21926 228 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 TAS2R38P59533 333 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 HSF5Q4G112 596 aaPredicted RBP12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 ACSBG2Q5FVE4 666 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 AGBL4Q5VU57 503 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 UGT3A1Q6NUS8 523 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 TRIM74Q86UV6 250 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 HDDC3Q8N4P3 179 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 BEND7Q8N7W2 519 aaPredicted RBP12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 ZNF781Q8N8C0 355 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 SREK1Q8WXA9 508 aaKnown RBP12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 HLA-CQ95604 372 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 KIAA1191Q96A73 305 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 NUS1Q96E22 293 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 TMEM120AQ9BXJ8 343 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 TFB2MQ9H5Q4 396 aaKnown RBP12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 RNF112Q9ULX5 631 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 A0A1W2PQF6 199 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 LRRC14BA6NHZ5 514 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 SHISA7A6NL88 538 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 OR2AG2A6NM03 316 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 PSMD11O00231 422 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 RNASEH1O60930 286 aaKnown RBP12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 RNASEH2AO75792 299 aaKnown RBP12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 SOD1P00441 154 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 ATP1B2P14415 290 aaPredicted RBP12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 HOXB2P14652 356 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 FOSL2P15408 326 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 RPS14P62263 151 aaKnown RBP12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 GRSF1Q12849 480 aaKnown RBP eCLIP12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 C11orf91Q3C1V1 193 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 TMEM52BQ4KMG9 183 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 ARL13AQ5H913 290 aaPredicted RBP12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 LSMEM2Q8N112 164 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 ZBTB2Q8N680 514 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 FITM2Q8N6M3 262 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 OR2T3Q8NH03 318 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 CXorf40AQ8TE69 158 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 PPP4R1Q8TF05 950 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 INPP5DQ92835 1189 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 FUBP1Q96AE4 644 aaKnown RBP12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 GUCD1Q96NT3 240 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 GABRG3Q99928 467 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 TRPV5Q9NQA5 729 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 SMOXQ9NWM0 555 aa12.03□□□□□ -0.48
SPTBN1-203ENST00000389980 RGSL1A5PLK6 1076 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 PRR23AA6NEV1 266 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 SUPT3HB4E1H0 165 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 NPC1O15118 1278 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 SUPT3HO75486 399 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 PCDH8O95206 1070 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 SIX3O95343 332 aaPredicted RBP12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 TSPAN8P19075 237 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 MPSTP25325 297 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 CCR7P32248 378 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 ARFIP2P53365 341 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 PRKAA2P54646 552 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 AQP5P55064 265 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 ATP6V0D1P61421 351 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 TFF2Q03403 129 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 RCN2Q14257 317 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 SMAD2Q15796 467 aaKnown RBP12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 PFKFB4Q16877 469 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 SDE2Q6IQ49 451 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 NRSN1Q8IZ57 195 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 PTGR2Q8N8N7 351 aaPredicted RBP12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 RHEBL1Q8TAI7 183 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 STAG3L4Q8TBR4 150 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 PIWIL2Q8TC59 973 aaKnown RBP12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 GANCQ8TET4 914 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 BTN2A2Q8WVV5 523 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 GLYATL1Q969I3 302 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 DCUN1D1Q96GG9 259 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 DRC3Q9H069 523 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 C8orf33Q9H7E9 229 aaPredicted RBP12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 RAD18Q9NS91 495 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 SPATS2LQ9NUQ6 558 aaKnown RBP12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 UTP6Q9NYH9 597 aaKnown RBP12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 NFKBIL1Q9UBC1 381 aaPredicted RBP12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 FAM8A1Q9UBU6 413 aa12.02□□□□□ -0.48
SPTBN1-203ENST00000389980 IGLON5A6NGN9 336 aa12.02□□□□□ -0.49
SPTBN1-203ENST00000389980 TMEM114B3SHH9 223 aa12.02□□□□□ -0.49
SPTBN1-203ENST00000389980 SGTAO43765 313 aa12.02□□□□□ -0.49
SPTBN1-203ENST00000389980 KERAO60938 352 aa12.02□□□□□ -0.49
SPTBN1-203ENST00000389980 ADH1BP00325 375 aa12.02□□□□□ -0.49
SPTBN1-203ENST00000389980 IL9P15248 144 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms