RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 SPPL2BQ8TCT7 592 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 KCNA7Q96RP8 456 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 ADGRE3Q9BY15 652 aa14.13□□□□□ -0.15
RTF1-201ENST00000389629 FAM124BQ9H5Z6 455 aaPredicted RBP14.13□□□□□ -0.15
RTF1-201ENST00000389629 RPF2Q9H7B2 306 aaKnown RBP14.13□□□□□ -0.15
RTF1-201ENST00000389629 DDX60LQ5H9U9 1706 aaKnown RBP14.12□□□□□ -0.15
RTF1-201ENST00000389629 A8MX80 341 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 TALDO1P37837 337 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 PAFAH1B3Q15102 231 aaKnown RBP14.12□□□□□ -0.15
RTF1-201ENST00000389629 RNFT2Q96EX2 444 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 SLC9A7Q96T83 725 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 TOGARAM1Q9Y4F4 1720 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 FAM72CH0Y354 149 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 SMIM10L2AP0DMW4 78 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 SMIM10L2BP0DMW5 78 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 FAM72AQ5TYM5 149 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 FAM72DQ6L9T8 149 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 FAM72BQ86X60 149 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 HOMEZQ8IX15 550 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 FAM9CQ8IZT9 166 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 MTMR14Q8NCE2 650 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 PCED1BQ96HM7 432 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 LRRC3Q9BY71 257 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 ZYG11BQ9C0D3 744 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 SLC39A8Q9C0K1 460 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 CCM2LQ9NUG4 571 aaPredicted RBP14.12□□□□□ -0.15
RTF1-201ENST00000389629 ZNF624Q9P2J8 865 aaPredicted RBP14.12□□□□□ -0.15
RTF1-201ENST00000389629 SPEF1Q9Y4P9 236 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 A0A1W2PQ72 361 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 ILVBLA1L0T0 632 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 C9IYK1 514 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 BTBD19C9JJ37 291 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 RFXANKO14593 260 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 PRKD3O94806 890 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 RHOCP08134 193 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 SLC35E2BP0CK96 405 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 COL6A1P12109 1028 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 COX7A2P14406 83 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 CYP3A5P20815 502 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 OPRL1P41146 370 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 SLC11A2P49281 568 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 DGKQP52824 942 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 ARSFP54793 590 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 GJA9P57773 515 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 ATP6V0D1P61421 351 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 RFTN1Q14699 578 aaPredicted RBP14.12□□□□□ -0.15
RTF1-201ENST00000389629 SYTL3Q4VX76 610 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 PIM3Q86V86 326 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 LGI2Q8N0V4 545 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 TTC29Q8NA56 475 aaPredicted RBP14.12□□□□□ -0.15
RTF1-201ENST00000389629 FEM1CQ96JP0 617 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 DNAJB9Q9UBS3 223 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 PTCH2Q9Y6C5 1203 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 STAU1O95793 577 aaKnown RBP14.12□□□□□ -0.15
RTF1-201ENST00000389629 SMIM18P0DKX4 95 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 ITIH1P19827 911 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 GLDCP23378 1020 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 TRPM4Q8TD43 1214 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 SH3KBP1Q96B97 665 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 PANX1Q96RD7 426 aa14.12□□□□□ -0.15
RTF1-201ENST00000389629 CXCL11O14625 94 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 GRM2Q14416 872 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 SMU1Q2TAY7 513 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 SLC2A7Q6PXP3 512 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 CLEC20AQ6ZU45 233 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 IGFN1Q86VF2 1251 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 OR52J3Q8NH60 311 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 ATP13A1Q9HD20 1204 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 CACNG4Q9UBN1 327 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 RPS6KA6Q9UK32 745 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 KIAA1551Q9HCM1 1747 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 A0A1B0GTW7 788 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 H0YC42 278 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 GRID2O43424 1007 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 TCEA1P23193 301 aaKnown RBP14.11□□□□□ -0.15
RTF1-201ENST00000389629 CRATP43155 626 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 RECQLP46063 649 aaPredicted RBP14.11□□□□□ -0.15
RTF1-201ENST00000389629 CDC42P60953 191 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 GPR153Q6NV75 609 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 EIF3MQ7L2H7 374 aaKnown RBP14.11□□□□□ -0.15
RTF1-201ENST00000389629 TMEM135Q86UB9 458 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 GFM1Q96RP9 751 aaKnown RBP14.11□□□□□ -0.15
RTF1-201ENST00000389629 COPS4Q9BT78 406 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 ANKRD60Q9BZ19 345 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 ERGIC3Q9Y282 383 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 ZNF510Q9Y2H8 683 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 PTGDR2Q9Y5Y4 395 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 SERPINA1P01009 418 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 BRCC3P46736 316 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 BEX3Q00994 111 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 MOB2Q70IA6 237 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 CEP97Q8IW35 865 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 CMTR2Q8IYT2 770 aaKnown RBP14.11□□□□□ -0.15
RTF1-201ENST00000389629 ABHD11Q8NFV4 315 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 GPR21Q99679 349 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 ZNF222Q9UK12 451 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 TNPO3Q9Y5L0 923 aaKnown RBP14.11□□□□□ -0.15
RTF1-201ENST00000389629 PPP2R3BQ9Y5P8 575 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 NRCAMQ92823 1304 aa14.11□□□□□ -0.15
RTF1-201ENST00000389629 PLSCR1O15162 318 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms