RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 CFAP61Q8NHU2 1237 aa5.31□□□□□ -1.56
RNU6-40P-201ENST00000384254 TBC1D16Q8TBP0 767 aa5.31□□□□□ -1.56
RNU6-40P-201ENST00000384254 SMG7Q92540 1137 aaKnown RBP5.31□□□□□ -1.56
RNU6-40P-201ENST00000384254 SPACA9Q96E40 222 aaPredicted RBP5.31□□□□□ -1.56
RNU6-40P-201ENST00000384254 SIPA1Q96FS4 1042 aa5.31□□□□□ -1.56
RNU6-40P-201ENST00000384254 ZNF778Q96MU6 729 aa5.31□□□□□ -1.56
RNU6-40P-201ENST00000384254 FCRL4Q96PJ5 515 aa5.31□□□□□ -1.56
RNU6-40P-201ENST00000384254 NTPCRQ9BSD7 190 aaKnown RBP5.31□□□□□ -1.56
RNU6-40P-201ENST00000384254 MOV10L1Q9BXT6 1211 aaKnown RBP5.31□□□□□ -1.56
RNU6-40P-201ENST00000384254 SEZ6LQ9BYH1 1024 aa5.31□□□□□ -1.56
RNU6-40P-201ENST00000384254 ZWILCHQ9H900 591 aa5.31□□□□□ -1.56
RNU6-40P-201ENST00000384254 RCC2Q9P258 522 aaKnown RBP5.31□□□□□ -1.56
RNU6-40P-201ENST00000384254 C5AR2Q9P296 337 aa5.31□□□□□ -1.56
RNU6-40P-201ENST00000384254 NFS1Q9Y697 457 aa5.31□□□□□ -1.56
RNU6-40P-201ENST00000384254 URADA6NGE7 173 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 CD8B2A6NJW9 211 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 SSX4O60224 188 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 TADA2AO75478 443 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 OAZ2O95190 189 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 RPN1P04843 607 aaKnown RBP5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 SCG2P13521 617 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 FDPSP14324 419 aaKnown RBP5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 DNASE1P24855 282 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 MC5RP33032 325 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 CDH13P55290 713 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 CD81P60033 236 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 GAGE2BQ13066 116 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 GAGE2EQ4V326 116 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 GAGE2AQ6NT46 116 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 ZNF534Q76KX8 674 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 MAP7D3Q8IWC1 876 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 C1orf52Q8N6N3 182 aaKnown RBP5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 ACVR1CQ8NER5 493 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 WDR20Q8TBZ3 569 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 ZNF830Q96NB3 372 aaPredicted RBP5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 MS4A10Q96PG2 267 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 SPAG5Q96R06 1193 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 C1QTNF7Q9BXJ2 289 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 GOLPH3LQ9H4A5 285 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 C1RLQ9NZP8 487 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 SELENONQ9NZV5 590 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 GAGE2DQ9UEU5 116 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 SLC24A2Q9UI40 661 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 SIX4Q9UIU6 781 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 PADI3Q9ULW8 664 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 PCDHA7Q9UN72 937 aa5.3□□□□□ -1.56
RNU6-40P-201ENST00000384254 IGLV5-52A0A0A0MRZ9 124 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 FAM90A10PA6NDY2 464 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 C15orf62A8K5M9 175 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 CCER2I3L3R5 266 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 BUD23O43709 281 aaKnown RBP5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 POLR2CP19387 275 aaPredicted RBP5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 ARRB2P32121 409 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 PCGF2P35227 344 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 AMPHP49418 695 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 ROR1Q01973 937 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 TFCP2Q12800 502 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 HSPB3Q12988 150 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 PLA2G7Q13093 441 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 MYBPHQ13203 477 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 MELKQ14680 651 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 NR1D2Q14995 579 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 ALDH1L2Q3SY69 923 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 TMEM35AQ53FP2 167 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 ALS2CLQ60I27 953 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 FAM47EQ6ZV65 393 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 GALNTL5Q7Z4T8 443 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 RNF113BQ8IZP6 322 aaKnown RBP5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 PGBD5Q8N414 524 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 NKAIN3Q8N8D7 197 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 XXYLT1Q8NBI6 393 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 NEXN-AS1Q8NBZ9 246 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 KCNH5Q8NCM2 988 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 EXD1Q8NHP7 514 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 KIF18AQ8NI77 898 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 SLC38A5Q8WUX1 472 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 TMED6Q8WW62 240 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 TANKQ92844 425 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 PIGTQ969N2 578 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 ADPGKQ9BRR6 497 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 NUP85Q9BW27 656 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 PPIL3Q9H2H8 161 aaKnown RBP5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 ANKZF1Q9H8Y5 726 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 SMARCAL1Q9NZC9 954 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 RNF7Q9UBF6 113 aa5.29□□□□□ -1.56
RNU6-40P-201ENST00000384254 IGLV5-37A0A075B6J1 123 aa5.28□□□□□ -1.56
RNU6-40P-201ENST00000384254 PLK4O00444 970 aa5.28□□□□□ -1.56
RNU6-40P-201ENST00000384254 CLDN14O95500 239 aa5.28□□□□□ -1.56
RNU6-40P-201ENST00000384254 BMP15O95972 392 aa5.28□□□□□ -1.56
RNU6-40P-201ENST00000384254 LINGO3P0C6S8 592 aa5.28□□□□□ -1.56
RNU6-40P-201ENST00000384254 CORO1AP31146 461 aaKnown RBP5.28□□□□□ -1.56
RNU6-40P-201ENST00000384254 USP8P40818 1118 aa5.28□□□□□ -1.56
RNU6-40P-201ENST00000384254 COG7P83436 770 aa5.28□□□□□ -1.56
RNU6-40P-201ENST00000384254 CDK3Q00526 305 aa5.28□□□□□ -1.56
RNU6-40P-201ENST00000384254 PLIN5Q00G26 463 aa5.28□□□□□ -1.56
RNU6-40P-201ENST00000384254 EGR4Q05215 589 aa5.28□□□□□ -1.56
RNU6-40P-201ENST00000384254 ZNF260Q3ZCT1 412 aa5.28□□□□□ -1.56
RNU6-40P-201ENST00000384254 HECTD3Q5T447 861 aa5.28□□□□□ -1.56
RNU6-40P-201ENST00000384254 TRNP1Q6NT89 227 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms