RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 VEGFDO43915 354 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 NUAK1O60285 661 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 SNX2O60749 519 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 SRP72O76094 671 aaKnown RBP9.12□□□□□ -0.95
HMGN1-202ENST00000380747 SUN1O94901 812 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 CDK14O94921 469 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 CDK4P11802 303 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 CA5AP35218 305 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 COILP38432 576 aaPredicted RBP9.12□□□□□ -0.95
HMGN1-202ENST00000380747 HADHAP40939 763 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 GRIA1P42261 906 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 ZNF140P52738 457 aaPredicted RBP9.12□□□□□ -0.95
HMGN1-202ENST00000380747 E2F1Q01094 437 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 CYP4F3Q08477 520 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 MSLNQ13421 630 aaPredicted RBP9.12□□□□□ -0.95
HMGN1-202ENST00000380747 ITGA9Q13797 1035 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 LRP8Q14114 963 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 SMAD1Q15797 465 aaKnown RBP9.12□□□□□ -0.95
HMGN1-202ENST00000380747 PLA2G4EQ3MJ16 856 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 KHDC1Q4VXA5 237 aaKnown RBP9.12□□□□□ -0.95
HMGN1-202ENST00000380747 CCDC38Q502W7 563 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 CCDC137Q6PK04 289 aaKnown RBP9.12□□□□□ -0.95
HMGN1-202ENST00000380747 MARCH9Q86YJ5 346 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 SFTPA2Q8IWL1 248 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 DTX3LQ8TDB6 740 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 ZDHHC1Q8WTX9 485 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 NAT6Q93015 286 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 DNAJC1Q96KC8 554 aaKnown RBP9.12□□□□□ -0.95
HMGN1-202ENST00000380747 TTC25Q96NG3 672 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 ABCG4Q9H172 646 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 FAM96AQ9H5X1 160 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 ASB8Q9H765 288 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 SPATS2LQ9NUQ6 558 aaKnown RBP9.12□□□□□ -0.95
HMGN1-202ENST00000380747 APPL1Q9UKG1 709 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 KCNK6Q9Y257 313 aa9.12□□□□□ -0.95
HMGN1-202ENST00000380747 PCYT1BQ9Y5K3 369 aaPredicted RBP9.12□□□□□ -0.95
HMGN1-202ENST00000380747 TRBV23OR9-2A0A075B6M9 112 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 EME2A4GXA9 379 aaPredicted RBP9.11□□□□□ -0.95
HMGN1-202ENST00000380747 FAM149AA5PLN7 773 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 GAPDHSO14556 408 aaPredicted RBP9.11□□□□□ -0.95
HMGN1-202ENST00000380747 ATXN7O15265 892 aaPredicted RBP9.11□□□□□ -0.95
HMGN1-202ENST00000380747 NOBOXO60393 691 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 PHF2O75151 1096 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 C1QL1O75973 258 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 GP1BAP07359 652 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 JUPP14923 745 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 MSH3P20585 1137 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 ITGALP20701 1170 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 AKT1P31749 480 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 MC4RP32245 332 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 ABCG1P45844 678 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 MAZP56270 477 aaKnown RBP9.11□□□□□ -0.95
HMGN1-202ENST00000380747 SESN2P58004 480 aaPredicted RBP9.11□□□□□ -0.95
HMGN1-202ENST00000380747 XIAPP98170 497 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 INSM1Q01101 510 aaPredicted RBP9.11□□□□□ -0.95
HMGN1-202ENST00000380747 TMEM115Q12893 351 aaPredicted RBP9.11□□□□□ -0.95
HMGN1-202ENST00000380747 GPS1Q13098 491 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 BIRC2Q13490 618 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 PEX6Q13608 980 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 CYP1B1Q16678 543 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 INSCQ1MX18 579 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 C14orf28Q4W4Y0 310 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 ZRANB3Q5FWF4 1079 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 PERM1Q5SV97 790 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 LDLRAP1Q5SW96 308 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 CERCAMQ5T4B2 595 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 GPRC6AQ5T6X5 926 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 HES3Q5TGS1 186 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 PAPD7Q5XG87 772 aaKnown RBP9.11□□□□□ -0.95
HMGN1-202ENST00000380747 OGFOD3Q6PK18 319 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 DET1Q7L5Y6 550 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 LRRTM4Q86VH4 590 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 TRAPPC5Q8IUR0 188 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 Q8N9G6 341 aaPredicted RBP9.11□□□□□ -0.95
HMGN1-202ENST00000380747 PPHLN1Q8NEY8 458 aaKnown RBP9.11□□□□□ -0.95
HMGN1-202ENST00000380747 GPR156Q8NFN8 814 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 SNIP1Q8TAD8 396 aaKnown RBP9.11□□□□□ -0.95
HMGN1-202ENST00000380747 GRK7Q8WTQ7 553 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 STYXQ8WUJ0 223 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 CCDC74AQ96AQ1 378 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 ZCCHC2Q9C0B9 1178 aaKnown RBP9.11□□□□□ -0.95
HMGN1-202ENST00000380747 OSGEPL1Q9H4B0 414 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 CASS4Q9NQ75 786 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 EIF2B3Q9NR50 452 aaKnown RBP9.11□□□□□ -0.95
HMGN1-202ENST00000380747 NLE1Q9NVX2 485 aaPredicted RBP9.11□□□□□ -0.95
HMGN1-202ENST00000380747 CRLS1Q9UJA2 301 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 ST14Q9Y5Y6 855 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 SAR1BQ9Y6B6 198 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 SLC30A1Q9Y6M5 507 aa9.11□□□□□ -0.95
HMGN1-202ENST00000380747 TDRD6O60522 2096 aaKnown RBP9.11□□□□□ -0.95
HMGN1-202ENST00000380747 LRP4O75096 1905 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 HEATR9A2RTY3 570 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 GPR89AB7ZAQ6 455 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 CHUKO15111 745 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 KMOO15229 486 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 OPA1O60313 960 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 LILRA1O75019 489 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 ECEL1O95672 775 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 MT-CO3P00414 261 aa9.1□□□□□ -0.95
HMGN1-202ENST00000380747 GPR89BP0CG08 455 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms