RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SPATA16Q9BXB7 569 aa19.6■□□□□ 0.73
PDLIM5-205ENST00000380180 ZNF385DQ9H6B1 395 aa19.6■□□□□ 0.73
PDLIM5-205ENST00000380180 SNX2O60749 519 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 RPS17P08708 135 aaKnown RBP19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 COX4I1P13073 169 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 HLA-EP13747 358 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 CD1EP15812 388 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 XPAP23025 273 aaPredicted RBP19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 DGKAP23743 735 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 CPOXP36551 454 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 PGM1P36871 562 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 RGS4P49798 205 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 COPAP53621 1224 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 HYAL1Q12794 435 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 PDGFRLQ15198 375 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 ACSBG2Q5FVE4 666 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 Q6ZVL8 140 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 SFTPA1Q8IWL2 248 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 ZBTB2Q8N680 514 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 ULK4Q96C45 1275 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 MARK4Q96L34 752 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 C1QTNF3Q9BXJ4 246 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 FAM83DQ9H4H8 585 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 SEMA4BQ9NPR2 832 aaPredicted RBP19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 SPATS2LQ9NUQ6 558 aaKnown RBP19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 SARDHQ9UL12 918 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 TMCO1Q9UM00 188 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 COL4A3Q01955 1670 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 IGLV3-16A0A075B6K0 115 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 MEI4A8MW99 385 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 NFKBIAP25963 317 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 PRDX6P30041 224 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 INHBCP55103 352 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 FNDC3BQ53EP0 1204 aaKnown RBP19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 NAIF1Q69YI7 327 aaPredicted RBP19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 SBSNQ6UWP8 590 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 ACTRT2Q8TDY3 377 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 ESAMQ96AP7 390 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 LATS2Q9NRM7 1088 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 CDH7Q9ULB5 785 aa19.59■□□□□ 0.73
PDLIM5-205ENST00000380180 A0A1B0GTL3 188 aa19.58■□□□□ 0.73
PDLIM5-205ENST00000380180 PIK3R1P27986 724 aa19.58■□□□□ 0.73
PDLIM5-205ENST00000380180 ETV3P41162 512 aa19.58■□□□□ 0.73
PDLIM5-205ENST00000380180 RALGDSQ12967 914 aa19.58■□□□□ 0.73
PDLIM5-205ENST00000380180 LCP2Q13094 533 aa19.58■□□□□ 0.73
PDLIM5-205ENST00000380180 ANKRD54Q6NXT1 300 aa19.58■□□□□ 0.73
PDLIM5-205ENST00000380180 CYHR1Q6ZMK1 362 aa19.58■□□□□ 0.73
PDLIM5-205ENST00000380180 FRA10AC1Q70Z53 315 aa19.58■□□□□ 0.73
PDLIM5-205ENST00000380180 DPPA4Q7L190 304 aa19.58■□□□□ 0.73
PDLIM5-205ENST00000380180 ADAMTSL2Q86TH1 951 aa19.58■□□□□ 0.73
PDLIM5-205ENST00000380180 MYO1HQ8N1T3 1032 aa19.58■□□□□ 0.73
PDLIM5-205ENST00000380180 DENND2DQ9H6A0 471 aaPredicted RBP19.58■□□□□ 0.73
PDLIM5-205ENST00000380180 ZBTB26Q9HCK0 441 aa19.58■□□□□ 0.73
PDLIM5-205ENST00000380180 PCTPQ9UKL6 214 aa19.58■□□□□ 0.73
PDLIM5-205ENST00000380180 DNAJC15Q9Y5T4 150 aa19.58■□□□□ 0.73
PDLIM5-205ENST00000380180 KPNA3O00505 521 aaPredicted RBP19.58■□□□□ 0.72
PDLIM5-205ENST00000380180 AZIN1O14977 448 aa19.58■□□□□ 0.72
PDLIM5-205ENST00000380180 FOXA1P55317 472 aa19.58■□□□□ 0.72
PDLIM5-205ENST00000380180 SLC25A3Q00325 362 aa19.58■□□□□ 0.72
PDLIM5-205ENST00000380180 FCHO2Q0JRZ9 810 aa19.58■□□□□ 0.72
PDLIM5-205ENST00000380180 DNAL1Q4LDG9 190 aa19.58■□□□□ 0.72
PDLIM5-205ENST00000380180 C9orf64Q5T6V5 341 aa19.58■□□□□ 0.72
PDLIM5-205ENST00000380180 PARS2Q7L3T8 475 aaKnown RBP19.58■□□□□ 0.72
PDLIM5-205ENST00000380180 AGAP11Q8TF27 550 aa19.58■□□□□ 0.72
PDLIM5-205ENST00000380180 ZNF483Q8TF39 744 aaPredicted RBP19.58■□□□□ 0.72
PDLIM5-205ENST00000380180 PLA2G2FQ9BZM2 168 aa19.58■□□□□ 0.72
PDLIM5-205ENST00000380180 MMADHCQ9H3L0 296 aaPredicted RBP19.58■□□□□ 0.72
PDLIM5-205ENST00000380180 NUDT4Q9NZJ9 180 aa19.58■□□□□ 0.72
PDLIM5-205ENST00000380180 ASB1Q9Y576 335 aa19.58■□□□□ 0.72
PDLIM5-205ENST00000380180 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.58■□□□□ 0.72
PDLIM5-205ENST00000380180 NAA20P61599 178 aa19.57■□□□□ 0.72
PDLIM5-205ENST00000380180 ZNF234Q14588 700 aa19.57■□□□□ 0.72
PDLIM5-205ENST00000380180 EIF4HQ15056 248 aaKnown RBP19.57■□□□□ 0.72
PDLIM5-205ENST00000380180 PPP1R3AQ16821 1122 aa19.57■□□□□ 0.72
PDLIM5-205ENST00000380180 HNRNPA1L2Q32P51 320 aaKnown RBP19.57■□□□□ 0.72
PDLIM5-205ENST00000380180 ARHGAP24Q8N264 748 aa19.57■□□□□ 0.72
PDLIM5-205ENST00000380180 PELI3Q8N2H9 469 aa19.57■□□□□ 0.72
PDLIM5-205ENST00000380180 PANX3Q96QZ0 392 aa19.57■□□□□ 0.72
PDLIM5-205ENST00000380180 KCNA7Q96RP8 456 aa19.57■□□□□ 0.72
PDLIM5-205ENST00000380180 THTPAQ9BU02 230 aa19.57■□□□□ 0.72
PDLIM5-205ENST00000380180 MBD1Q9UIS9 605 aaPredicted RBP19.57■□□□□ 0.72
PDLIM5-205ENST00000380180 ADAMTS6Q9UKP5 1117 aa19.57■□□□□ 0.72
PDLIM5-205ENST00000380180 COPG1Q9Y678 874 aaKnown RBP19.57■□□□□ 0.72
PDLIM5-205ENST00000380180 SLC22A2O15244 555 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 MAGEC1O60732 1142 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 PRNPP04156 253 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 ADSLP30566 484 aaPredicted RBP19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 METAP1P53582 386 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 DCDC1P59894 354 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 RUNX3Q13761 415 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 GRM2Q14416 872 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 GRIN2CQ14957 1233 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 KANK2Q63ZY3 851 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 CHSY3Q70JA7 882 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 TERB1Q8NA31 727 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 C3orf30Q96M34 536 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 GDF15Q99988 308 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 HGH1Q9BTY7 390 aa19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 FAM126AQ9BYI3 521 aaPredicted RBP19.56■□□□□ 0.72
PDLIM5-205ENST00000380180 EDDM13A0A1B0GTR0 161 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms