RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 TPRG1Q6ZUI0 275 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 USP45Q70EL2 814 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 FRA10AC1Q70Z53 315 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 KBTBD6Q86V97 674 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 PLPP6Q8IY26 295 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 CPNE9Q8IYJ1 553 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 CMTM8Q8IZV2 173 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 MYO1HQ8N1T3 1032 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 PCYOX1LQ8NBM8 494 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 RIN3Q8TB24 985 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 SHKBP1Q8TBC3 707 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 TSPEARQ8WU66 669 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 EEF1AKMT1Q8WVE0 214 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 BHMTQ93088 406 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 FAM136AQ96C01 138 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 ULK4Q96C45 1275 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 CCDC124Q96CT7 223 aaKnown RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 EID2BQ96D98 161 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 ECHDC3Q96DC8 303 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 OTUB2Q96DC9 234 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 ZNF382Q96SR6 550 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 RAD9AQ99638 391 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 SLC30A3Q99726 388 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 TCF25Q9BQ70 676 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 AKTIPQ9H8T0 292 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 LATS2Q9NRM7 1088 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 CACNA2D2Q9NY47 1150 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 CD274Q9NZQ7 290 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 SUCOQ9UBS9 1254 aaKnown RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 CRLS1Q9UJA2 301 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 INTS6Q9UL03 887 aaKnown RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 PPM1HQ9ULR3 514 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 AGAP14A8MT82 685 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 EIF3FO00303 357 aaPredicted RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 GAPDHSO14556 408 aaPredicted RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 CASQ2O14958 399 aaPredicted RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 RAD51BO15315 384 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 NRP2O60462 931 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 CLDN7O95471 211 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 PRAMEF12O95522 483 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 POP4O95707 220 aaKnown RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 BAG2O95816 211 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 HNRNPA1P09651 372 aaKnown RBP eCLIP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 IDO1P14902 403 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 BPIP17213 487 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 TSPAN8P19075 237 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 NFKBIAP25963 317 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 CLNS1AP54105 237 aaKnown RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 PSME3P61289 254 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 LRP8Q14114 963 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 FLOT2Q14254 428 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 TGFBIQ15582 683 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 PPP1R3AQ16821 1122 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 TTLL9Q3SXZ7 439 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 CARD16Q5EG05 197 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 DGKKQ5KSL6 1271 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 IRGCQ6NXR0 463 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 PRMT9Q6P2P2 845 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 ELMSAN1Q6PJG2 1045 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 FAM151BQ6UXP7 276 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 PHYKPLQ8IUZ5 450 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 DDIASQ8IXT1 998 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 MIER2Q8N344 545 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 MRPL43Q8N983 215 aaKnown RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 HMGCLL1Q8TB92 370 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 SCRN2Q96FV2 425 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 NSUN5Q96P11 429 aaKnown RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 MCCC1Q96RQ3 725 aaPredicted RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 NPAS2Q99743 824 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 HGH1Q9BTY7 390 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 FAM126AQ9BYI3 521 aaPredicted RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 SUV39H2Q9H5I1 410 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 SEMA4BQ9NPR2 832 aaPredicted RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 RIC8BQ9NVN3 520 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 PLK2Q9NYY3 685 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 C6orf203Q9P0P8 240 aaPredicted RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 GALPQ9UBC7 116 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 HECAQ9UBI9 543 aaPredicted RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 IKZF3Q9UKT9 509 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 CLEC4EQ9ULY5 219 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 PSMD13Q9UNM6 376 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 FNDC3AQ9Y2H6 1198 aaKnown RBP10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 NDUFAF1Q9Y375 327 aa10.35□□□□□ -0.75
POLR2J3-201ENST00000379340 LRRC14BA6NHZ5 514 aa10.34□□□□□ -0.75
POLR2J3-201ENST00000379340 MRASO14807 208 aa10.34□□□□□ -0.75
POLR2J3-201ENST00000379340 CFLARO15519 480 aa10.34□□□□□ -0.75
POLR2J3-201ENST00000379340 PEX1O43933 1283 aa10.34□□□□□ -0.75
POLR2J3-201ENST00000379340 XYLBO75191 536 aa10.34□□□□□ -0.75
POLR2J3-201ENST00000379340 BCAS2O75934 225 aaPredicted RBP10.34□□□□□ -0.75
POLR2J3-201ENST00000379340 POU2F2P09086 479 aa10.34□□□□□ -0.75
POLR2J3-201ENST00000379340 PRR35P0CG20 571 aa10.34□□□□□ -0.75
POLR2J3-201ENST00000379340 CBSLP0DN79 551 aa10.34□□□□□ -0.75
POLR2J3-201ENST00000379340 PABPC1P11940 636 aaKnown RBP10.34□□□□□ -0.75
POLR2J3-201ENST00000379340 GJA1P17302 382 aa10.34□□□□□ -0.75
POLR2J3-201ENST00000379340 GPX3P22352 226 aa10.34□□□□□ -0.75
POLR2J3-201ENST00000379340 HLA-FP30511 346 aa10.34□□□□□ -0.75
POLR2J3-201ENST00000379340 CBSP35520 551 aa10.34□□□□□ -0.75
POLR2J3-201ENST00000379340 BMPR1AP36894 532 aa10.34□□□□□ -0.75
POLR2J3-201ENST00000379340 NSG1P42857 185 aa10.34□□□□□ -0.75
POLR2J3-201ENST00000379340 THOP1P52888 689 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms