RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 DNMT3AQ9Y6K1 912 aaPredicted RBP16.74■□□□□ 0.27
RER1-202ENST00000378512 IGHV1OR21-1A0A087WYE8 117 aa16.73■□□□□ 0.27
RER1-202ENST00000378512 CCDC187A0A096LP49 1063 aa16.73■□□□□ 0.27
RER1-202ENST00000378512 TRBV5-4A0A0C4DH59 114 aa16.73■□□□□ 0.27
RER1-202ENST00000378512 ETS1P14921 441 aa16.73■□□□□ 0.27
RER1-202ENST00000378512 XRCC1P18887 633 aaPredicted RBP16.73■□□□□ 0.27
RER1-202ENST00000378512 CXCR5P32302 372 aa16.73■□□□□ 0.27
RER1-202ENST00000378512 CTSCP53634 463 aa16.73■□□□□ 0.27
RER1-202ENST00000378512 INHBCP55103 352 aa16.73■□□□□ 0.27
RER1-202ENST00000378512 TMPRSS3P57727 454 aa16.73■□□□□ 0.27
RER1-202ENST00000378512 OR1D5P58170 312 aa16.73■□□□□ 0.27
RER1-202ENST00000378512 UBE2IP63279 158 aaKnown RBP16.73■□□□□ 0.27
RER1-202ENST00000378512 EIF3IQ13347 325 aaKnown RBP16.73■□□□□ 0.27
RER1-202ENST00000378512 SNX1Q13596 522 aa16.73■□□□□ 0.27
RER1-202ENST00000378512 AGAP9Q5VTM2 703 aa16.73■□□□□ 0.27
RER1-202ENST00000378512 CRTC3Q6UUV7 619 aa16.73■□□□□ 0.27
RER1-202ENST00000378512 ZNF574Q6ZN55 896 aaPredicted RBP16.73■□□□□ 0.27
RER1-202ENST00000378512 WDR36Q8NI36 951 aaKnown RBP16.73■□□□□ 0.27
RER1-202ENST00000378512 ZCCHC2Q9C0B9 1178 aaKnown RBP16.73■□□□□ 0.27
RER1-202ENST00000378512 PRDM8Q9NQV8 689 aa16.73■□□□□ 0.27
RER1-202ENST00000378512 PAK5Q9P286 719 aa16.73■□□□□ 0.27
RER1-202ENST00000378512 IGLV3-16A0A075B6K0 115 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 TEX51A0A1B0GUA7 166 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 ZW10O43264 779 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 SGTAO43765 313 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 ZIC2O95409 532 aaPredicted RBP16.72■□□□□ 0.27
RER1-202ENST00000378512 IFNB1P01574 187 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 BRAFP15056 766 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 RPL22P35268 128 aaKnown RBP16.72■□□□□ 0.27
RER1-202ENST00000378512 GPLD1P80108 840 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 HHEXQ03014 270 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 CFHR1Q03591 330 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 CDH17Q12864 832 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 CLN3Q13286 438 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 INSCQ1MX18 579 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 GPR33Q49SQ1 333 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 BROXQ5VW32 411 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 XKR5Q6UX68 686 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 C4orf22Q6V702 233 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 SNX20Q7Z614 316 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 CLEC14AQ86T13 490 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 PRUNE1Q86TP1 453 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 PRELID2Q8N945 189 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 GDAP1Q8TB36 358 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 STYXQ8WUJ0 223 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 ZNF514Q96K75 400 aaPredicted RBP16.72■□□□□ 0.27
RER1-202ENST00000378512 ASB8Q9H765 288 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 UCK1Q9HA47 277 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 CASS4Q9NQ75 786 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 HOMER3Q9NSC5 361 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 SCHIP1Q9P0W5 487 aaPredicted RBP16.72■□□□□ 0.27
RER1-202ENST00000378512 PDP2Q9P2J9 529 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 RIMKLBQ9ULI2 386 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 SSUH2Q9Y2M2 353 aa16.72■□□□□ 0.27
RER1-202ENST00000378512 ZSCAN12O43309 604 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 CEP104O60308 925 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 TPH1P17752 444 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 ALDH4A1P30038 563 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 SRSF6Q13247 344 aaKnown RBP16.71■□□□□ 0.27
RER1-202ENST00000378512 GTF2H3Q13889 308 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 RAB11FIP2Q7L804 512 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 SLC9B2Q86UD5 537 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 PIM3Q86V86 326 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 TRAPPC5Q8IUR0 188 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 NXPE1Q8N323 547 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 AVL9Q8NBF6 648 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 OR52K1Q8NGK4 314 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 TMEM159Q96B96 161 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 CDKN2AIPNLQ96HQ2 116 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 DNAJC1Q96KC8 554 aaKnown RBP16.71■□□□□ 0.27
RER1-202ENST00000378512 LINC00615Q96LM1 132 aaPredicted RBP16.71■□□□□ 0.27
RER1-202ENST00000378512 TTC25Q96NG3 672 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 RANBP9Q96S59 729 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 DPYSL5Q9BPU6 564 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 RAB6BQ9NRW1 208 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 ZNF624Q9P2J8 865 aaPredicted RBP16.71■□□□□ 0.27
RER1-202ENST00000378512 CPNE7Q9UBL6 633 aa16.71■□□□□ 0.27
RER1-202ENST00000378512 KLHL33A6NCF5 533 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 PLD2O14939 933 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 ZSCAN5DPP0CG00 497 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 ITIH1P19827 911 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 CSF2RBP32927 897 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 GRIA1P42261 906 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 LIMK2P53671 638 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 EPHA4P54764 986 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 ACVR1Q04771 509 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 POU6F1Q14863 301 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 TGIF1Q15583 401 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 LONRF2Q1L5Z9 754 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 PLA2G4EQ3MJ16 856 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 BCL7AQ4VC05 210 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 ZNF843Q8N446 348 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 FBXO39Q8N4B4 442 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 TAB3Q8N5C8 712 aaPredicted RBP16.7■□□□□ 0.26
RER1-202ENST00000378512 CCDC89Q8N998 374 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 OR4D9Q8NGE8 314 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 SH3KBP1Q96B97 665 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 ULK4Q96C45 1275 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 PBKQ96KB5 322 aa16.7■□□□□ 0.26
RER1-202ENST00000378512 NUDT22Q9BRQ3 303 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms