RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 SYT13Q7L8C5 426 aa20.81■□□□□ 0.92
RNF38-205ENST00000377877 SYNPOQ8N3V7 929 aa20.81■□□□□ 0.92
RNF38-205ENST00000377877 SGF29Q96ES7 293 aa20.81■□□□□ 0.92
RNF38-205ENST00000377877 SHDQ96IW2 340 aa20.81■□□□□ 0.92
RNF38-205ENST00000377877 MYCBPQ99417 103 aaPredicted RBP20.81■□□□□ 0.92
RNF38-205ENST00000377877 NMRAL1Q9HBL8 299 aa20.81■□□□□ 0.92
RNF38-205ENST00000377877 TBC1D3DA0A087WVF3 549 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 TBC1D3IA0A087WXS9 549 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 TBC1D3EA0A087X179 549 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 TBC1D3KA0A087X1G2 549 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 TBC1D3FA6NER0 549 aaPredicted RBP20.8■□□□□ 0.92
RNF38-205ENST00000377877 TBC1D3LB9A6J9 549 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 TRIM16O95361 564 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 TBC1D3HP0C7X1 549 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 TPMTP51580 245 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 WSCD2Q2TBF2 565 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 TBC1D3GQ6DHY5 549 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 TBC1D3CQ6IPX1 549 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 NAPRTQ6XQN6 538 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 MACC1Q6ZN28 852 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 USP30Q70CQ3 517 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 TBC1D3Q8IZP1 549 aaPredicted RBP20.8■□□□□ 0.92
RNF38-205ENST00000377877 FSTL5Q8N475 847 aaPredicted RBP20.8■□□□□ 0.92
RNF38-205ENST00000377877 CD200R1Q8TD46 325 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 KCNJ9Q92806 393 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 VPS35Q96QK1 796 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 MBNL1Q9NR56 388 aaKnown RBP20.8■□□□□ 0.92
RNF38-205ENST00000377877 CPSF2Q9P2I0 782 aaKnown RBP20.8■□□□□ 0.92
RNF38-205ENST00000377877 BAIAP2L1Q9UHR4 511 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 MCM8Q9UJA3 840 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 COMMD10Q9Y6G5 202 aa20.8■□□□□ 0.92
RNF38-205ENST00000377877 A0A1W2PQU0 124 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 SGTAO43765 313 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 RNGTTO60942 597 aaKnown RBP20.79■□□□□ 0.92
RNF38-205ENST00000377877 VPS26AO75436 327 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 SLC25A14O95258 325 aaPredicted RBP20.79■□□□□ 0.92
RNF38-205ENST00000377877 ZNF37AP17032 561 aaPredicted RBP20.79■□□□□ 0.92
RNF38-205ENST00000377877 ACSL1P33121 698 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 SKIV2L2P42285 1042 aaKnown RBP20.79■□□□□ 0.92
RNF38-205ENST00000377877 GPR1P46091 355 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 LRRC32Q14392 662 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 RAET1GQ6H3X3 334 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 TRIM74Q86UV6 250 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 NLRP8Q86W28 1048 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 DDHD1Q8NEL9 900 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 TBC1D17Q9HA65 648 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 POPDC3Q9HBV1 291 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 GNPTGQ9UJJ9 305 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 FZD4Q9ULV1 537 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 NCKAP1Q9Y2A7 1128 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 E5RI56 91 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 LTA4HP09960 611 aaKnown RBP20.79■□□□□ 0.92
RNF38-205ENST00000377877 ATP1B2P14415 290 aaPredicted RBP20.79■□□□□ 0.92
RNF38-205ENST00000377877 CD9P21926 228 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 AKT1P31749 480 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 KCNC1P48547 511 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 CGB2Q6NT52 195 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 RGS9BPQ6ZS82 235 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 SCYL1Q96KG9 808 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 LENG8Q96PV6 779 aaPredicted RBP20.79■□□□□ 0.92
RNF38-205ENST00000377877 C1QTNF2Q9BXJ5 285 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 PITPNM3Q9BZ71 974 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 ITM2CQ9NQX7 267 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 DHRS7Q9Y394 339 aa20.79■□□□□ 0.92
RNF38-205ENST00000377877 H3BMM5 538 aa20.78■□□□□ 0.92
RNF38-205ENST00000377877 MAT2AP31153 395 aaKnown RBP20.78■□□□□ 0.92
RNF38-205ENST00000377877 DGKEP52429 567 aa20.78■□□□□ 0.92
RNF38-205ENST00000377877 RPS21P63220 83 aaKnown RBP20.78■□□□□ 0.92
RNF38-205ENST00000377877 TMEM259Q4ZIN3 620 aa20.78■□□□□ 0.92
RNF38-205ENST00000377877 LRRC8EQ6NSJ5 796 aa20.78■□□□□ 0.92
RNF38-205ENST00000377877 KBTBD6Q86V97 674 aa20.78■□□□□ 0.92
RNF38-205ENST00000377877 UBALD2Q8IYN6 164 aa20.78■□□□□ 0.92
RNF38-205ENST00000377877 PGBD3Q8N328 593 aa20.78■□□□□ 0.92
RNF38-205ENST00000377877 KLHL29Q96CT2 875 aa20.78■□□□□ 0.92
RNF38-205ENST00000377877 ASB2Q96Q27 587 aa20.78■□□□□ 0.92
RNF38-205ENST00000377877 NELL2Q99435 816 aa20.78■□□□□ 0.92
RNF38-205ENST00000377877 POLMQ9NP87 494 aaPredicted RBP20.78■□□□□ 0.92
RNF38-205ENST00000377877 GEMIN8Q9NWZ8 242 aaKnown RBP20.78■□□□□ 0.92
RNF38-205ENST00000377877 TRMT6Q9UJA5 497 aaKnown RBP20.78■□□□□ 0.92
RNF38-205ENST00000377877 IKZF3Q9UKT9 509 aa20.78■□□□□ 0.92
RNF38-205ENST00000377877 TARM1B6A8C7 271 aa20.77■□□□□ 0.92
RNF38-205ENST00000377877 G3V2L1 256 aa20.77■□□□□ 0.92
RNF38-205ENST00000377877 TK2O00142 265 aa20.77■□□□□ 0.92
RNF38-205ENST00000377877 STK25O00506 426 aa20.77■□□□□ 0.92
RNF38-205ENST00000377877 ZBTB14O43829 449 aa20.77■□□□□ 0.92
RNF38-205ENST00000377877 PYGLP06737 847 aa20.77■□□□□ 0.92
RNF38-205ENST00000377877 BPGMP07738 259 aa20.77■□□□□ 0.92
RNF38-205ENST00000377877 KCNA4P22459 653 aa20.77■□□□□ 0.92
RNF38-205ENST00000377877 PPP2CBP62714 309 aa20.77■□□□□ 0.92
RNF38-205ENST00000377877 PPP2CAP67775 309 aa20.77■□□□□ 0.92
RNF38-205ENST00000377877 TMEM115Q12893 351 aaPredicted RBP20.77■□□□□ 0.92
RNF38-205ENST00000377877 FAM83EQ2M2I3 478 aa20.77■□□□□ 0.92
RNF38-205ENST00000377877 CCDC153Q494R4 210 aa20.77■□□□□ 0.92
RNF38-205ENST00000377877 ANO7Q6IWH7 933 aa20.77■□□□□ 0.92
RNF38-205ENST00000377877 PNCKQ6P2M8 343 aa20.77■□□□□ 0.92
RNF38-205ENST00000377877 BEND7Q8N7W2 519 aaPredicted RBP20.77■□□□□ 0.92
RNF38-205ENST00000377877 RASGEF1AQ8N9B8 481 aa20.77■□□□□ 0.92
RNF38-205ENST00000377877 EEF1AKMT1Q8WVE0 214 aa20.77■□□□□ 0.92
RNF38-205ENST00000377877 DCUN1D1Q96GG9 259 aa20.77■□□□□ 0.92
RNF38-205ENST00000377877 SLC17A9Q9BYT1 436 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms