RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 TMEM198Q66K66 360 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 P3H2Q8IVL5 708 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 OTULINQ96BN8 352 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 MAPK9P45984 424 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 STK19P49842 368 aaPredicted RBP14.36□□□□□ -0.11
TCOF1-202ENST00000377797 WDR5P61964 334 aaKnown RBP14.36□□□□□ -0.11
TCOF1-202ENST00000377797 PCLAFQ15004 111 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 STEAP4Q687X5 459 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 SULT1C3Q6IMI6 304 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 SLC8B1Q6J4K2 584 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 SPATA19Q7Z5L4 167 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 ANKRD27Q96NW4 1050 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 CLSTN3Q9BQT9 956 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 EBF3Q9H4W6 596 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 RETREG1Q9H6L5 497 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 EGFL7Q9UHF1 273 aa14.36□□□□□ -0.11
TCOF1-202ENST00000377797 CLDN9O95484 217 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 IFNA14P01570 189 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 FYNP06241 537 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 BMPR1AP36894 532 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 HERVK_113P63132 956 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.35□□□□□ -0.11
TCOF1-202ENST00000377797 ZNF783Q6ZMS7 281 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 STK32CQ86UX6 486 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 C2orf73Q8N5S3 287 aaPredicted RBP14.35□□□□□ -0.11
TCOF1-202ENST00000377797 MAGEB10Q96LZ2 347 aaPredicted RBP14.35□□□□□ -0.11
TCOF1-202ENST00000377797 OR52E6Q96RD3 313 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 ERVK-6Q9BXR3 956 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 ZDHHC3Q9NYG2 299 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 SUFUQ9UMX1 484 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 ERVW-1Q9UQF0 538 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 PGGT1BP53609 377 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 SEC13P55735 322 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 IL23RQ5VWK5 629 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 RANBP10Q6VN20 620 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 TMPRSS11BQ86T26 416 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 FLCNQ8NFG4 579 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 FBXO30Q8TB52 745 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 QRFPRQ96P65 431 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 UGT2B28Q9BY64 529 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 LRTM1Q9HBL6 345 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 SIRPGQ9P1W8 387 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 NRXN2Q9P2S2 1712 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 CDC7O00311 574 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 WNT9AO14904 365 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 GDI1P31150 447 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 C2orf27AQ580R0 203 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 EMC10Q5UCC4 262 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 LRRC66Q68CR7 880 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 MMAAQ8IVH4 418 aaKnown RBP14.35□□□□□ -0.11
TCOF1-202ENST00000377797 ACTRT2Q8TDY3 377 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 BBS4Q96RK4 519 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 CXorf56Q9H5V9 222 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 DENND2DQ9H6A0 471 aaPredicted RBP14.35□□□□□ -0.11
TCOF1-202ENST00000377797 ANAPC2Q9UJX6 822 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 FFAR2O15552 330 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 KIF1CO43896 1103 aaKnown RBP14.35□□□□□ -0.11
TCOF1-202ENST00000377797 ECI2O75521 394 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 VPS26BQ4G0F5 336 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 FBXW8Q8N3Y1 598 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 FERD3LQ96RJ6 166 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 RIOK2Q9BVS4 552 aaKnown RBP14.35□□□□□ -0.11
TCOF1-202ENST00000377797 ATAD3AQ9NVI7 634 aa14.35□□□□□ -0.11
TCOF1-202ENST00000377797 PCCBP05166 539 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 ANPEPP15144 967 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 RPL26P61254 145 aaKnown RBP14.34□□□□□ -0.11
TCOF1-202ENST00000377797 TMED1Q13445 227 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 CPSF7Q8N684 471 aaKnown RBP14.34□□□□□ -0.11
TCOF1-202ENST00000377797 ATG16L2Q8NAA4 619 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 CADM1Q9BY67 442 aaKnown RBP14.34□□□□□ -0.11
TCOF1-202ENST00000377797 ISM1B1AKI9 464 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 K7ERQ8 282 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 ADSLP30566 484 aaPredicted RBP14.34□□□□□ -0.11
TCOF1-202ENST00000377797 RAD23AP54725 363 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 TMEM79Q9BSE2 394 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 NLE1Q9NVX2 485 aaPredicted RBP14.34□□□□□ -0.11
TCOF1-202ENST00000377797 IL36AQ9UHA7 158 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 TMEM233B4DJY2 109 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 CHIT1Q13231 466 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 DHDDSQ86SQ9 333 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 RGL4Q8IZJ4 473 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 BEND7Q8N7W2 519 aaPredicted RBP14.34□□□□□ -0.11
TCOF1-202ENST00000377797 ZNF784Q8NCA9 323 aaPredicted RBP14.34□□□□□ -0.11
TCOF1-202ENST00000377797 PTCD3Q96EY7 689 aaKnown RBP14.34□□□□□ -0.11
TCOF1-202ENST00000377797 OR52B2Q96RD2 323 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 PANX1Q96RD7 426 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 SGK2Q9HBY8 427 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 SPHK2Q9NRA0 654 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 AASDHPPTQ9NRN7 309 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 SAGE1Q9NXZ1 904 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 PDP2Q9P2J9 529 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 B4GALT6Q9UBX8 382 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 KERAO60938 352 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 SEC24AO95486 1093 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 GMPRP36959 345 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 ARSDP51689 593 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 FAM189BP81408 668 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 VITQ6UXI7 678 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 C17orf64Q86WR6 236 aa14.34□□□□□ -0.11
TCOF1-202ENST00000377797 ARHGAP12Q8IWW6 846 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms