RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 TK2O00142 265 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 DCLK1O15075 740 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 RGS14O43566 566 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 LINC00032P0C843 101 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 BST1Q10588 318 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 TAF11Q15544 211 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 GPR33Q49SQ1 333 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 C10orf107Q8IVU9 208 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 VN1R2Q8NFZ6 395 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 PTCD2Q8WV60 388 aaKnown RBP8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 MAGEB18Q96M61 343 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 PHF7Q9BWX1 381 aaPredicted RBP8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 TMEM120AQ9BXJ8 343 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 RASSF4Q9H2L5 321 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 TMEM245Q9H330 911 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 KIF17Q9P2E2 1029 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 LYPLA1O75608 230 aaPredicted RBP8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 COX7A2P14406 83 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 JUNDP17535 347 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 FECHP22830 423 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 SLC7A9P82251 487 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 TMEM115Q12893 351 aaPredicted RBP8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 PWP1Q13610 501 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 TERF2Q15554 542 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 OASLQ15646 514 aaKnown RBP8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 DRICH1Q6PGQ1 229 aaPredicted RBP8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 HTR3DQ70Z44 454 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 TMCO5AQ8N6Q1 288 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 CEP70Q8NHQ1 597 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 TRMT2BQ96GJ1 504 aaKnown RBP8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 ZNF514Q96K75 400 aaPredicted RBP8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 TSSK3Q96PN8 268 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 GBP5Q96PP8 586 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 MYADMQ96S97 322 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 TCF12Q99081 682 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 SGK2Q9HBY8 427 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 SLCO1B3Q9NPD5 702 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 ZNF358Q9NW07 568 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 ZDHHC3Q9NYG2 299 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 DOCK1Q14185 1865 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 UBXN8O00124 270 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 CHUKO15111 745 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 TARSP26639 723 aaKnown RBP8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 CLDN2P57739 230 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 KIAA0930Q6ICG6 404 aaPredicted RBP8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 ADGRG2Q8IZP9 1017 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 ADAMTS19Q8TE59 1207 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 SLC44A1Q8WWI5 657 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 JPH3Q8WXH2 748 aaPredicted RBP8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 ANKRD7Q92527 254 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 APOLD1Q96LR9 279 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 CCDC138Q96M89 665 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 CEP295NLQ96MC4 621 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 HSPA12BQ96MM6 686 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 ZNF641Q96N77 438 aaPredicted RBP8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 LENG8Q96PV6 779 aaPredicted RBP8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 UHRF1Q96T88 793 aaPredicted RBP8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 AIF1LQ9BQI0 150 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 RMND5AQ9H871 391 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 IPPKQ9H8X2 491 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 CCDC177Q9NQR7 707 aaPredicted RBP8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 TMEM30AQ9NV96 361 aa8.37□□□□□ -1.07
CRNKL1-202ENST00000377340 A0A0J9YVX5 310 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 URADA6NGE7 173 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 SERPINI2O75830 405 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 OTCP00480 354 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 EPORP19235 508 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 S100A3P33764 101 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 PGFP49763 221 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 SKOR1P84550 965 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 NIPAL4Q0D2K0 466 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 CHIT1Q13231 466 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 SLC5A9Q2M3M2 681 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 KRT80Q6KB66 452 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 PIM3Q86V86 326 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 EXOC3L1Q86VI1 746 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 PGM2Q96G03 612 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 TOE1Q96GM8 510 aaKnown RBP8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 SMIM14Q96QK8 99 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 GSDMCQ9BYG8 508 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 SLC17A9Q9BYT1 436 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 FANCEQ9HB96 536 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 DNAJC11Q9NVH1 559 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 ARID1BQ8NFD5 2236 aaPredicted RBP8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 WNK3Q9BYP7 1800 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 TMEM265A0A087WTH1 108 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 SLCO1B7G3V0H7 640 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 SASH3O75995 380 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 CHRM1P11229 460 aaPredicted RBP8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 C6P13671 934 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 HGFP14210 728 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 ZNF30P17039 623 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 HMGA1P17096 107 aaKnown RBP8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 IL10P22301 178 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 EPHA3P29320 983 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 RPL14P50914 215 aaKnown RBP8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 COPAP53621 1224 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 INPP5AQ14642 412 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 KLHDC10Q6PID8 442 aa8.36□□□□□ -1.07
CRNKL1-202ENST00000377340 NCEH1Q6PIU2 408 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms